RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 IL32P24001 234 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 STOMP27105 288 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 RGS6P49758 472 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 SPOCK1Q08629 439 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 DBPQ10586 325 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 SMN1Q16637 294 aaKnown RBP7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZNF544Q6NX49 715 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 GALNT4Q8N4A0 578 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 NANOGP1Q8N7R0 232 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 PROKR2Q8NFJ6 384 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 SLAMF6Q96DU3 332 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 RNFT2Q96EX2 444 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZNF701Q9NV72 531 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 NDRG3Q9UGV2 375 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 CNTRLQ7Z7A1 2325 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 MYO7BQ6PIF6 2116 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 HELZ2Q9BYK8 2649 aaKnown RBP7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 CRYBG3Q68DQ2 2970 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 TUBAL3A6NHL2 446 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 RER1O15258 196 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 GPX5O75715 221 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 ALX3O95076 343 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 CLIC3O95833 236 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 HLA-HP01893 362 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 PSMA6P60900 246 aaKnown RBP7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 KLHL22Q53GT1 634 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 SLC16A14Q7RTX9 510 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 LYPD6Q86Y78 171 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 KRTAP1-3Q8IUG1 177 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 CCDC54Q8NEL0 328 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 LYZL4Q96KX0 146 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 DOK1Q99704 481 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 TLNRD1Q9H1K6 362 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 SRA1Q9HD15 236 aaKnown RBP7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 ASH2LQ9UBL3 628 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 FBXO9Q9UK97 447 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 CAB39Q9Y376 341 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 RHBDD3Q9Y3P4 386 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 EFCAB10A6NFE3 127 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 E7EQL1 145 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 IGHV3-13P01766 116 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 GLRXP35754 106 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 CCDC58Q4VC31 144 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZNF774Q6NX45 483 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZNF611Q8N823 705 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 OR1J2Q8NGS2 313 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 LINC01560Q8TB33 94 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZMYND19Q96E35 227 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 ATF6BQ99941 703 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 TRAF4Q9BUZ4 470 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 REPIN1Q9BWE0 567 aaKnown RBP7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 DNAJC27Q9NZQ0 273 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 LRP12Q9Y561 859 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 A0A1B0GTI1 187 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 HS3ST1O14792 307 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 SGCEO43556 437 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 FARS2O95363 451 aaKnown RBP7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 PPOXP50336 477 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 MMP15P51511 669 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 MVKQ03426 396 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 DCXRQ7Z4W1 244 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 PRSS35Q8N3Z0 413 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 SLC30A7Q8NEW0 376 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 RHNO1Q9BSD3 238 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 OPA3Q9H6K4 179 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 ESRP2Q9H6T0 727 aaKnown RBP7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 NUFIP1Q9UHK0 495 aaKnown RBP7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 A0A1W2PPL8 197 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 IQCF6A8MYZ5 107 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 H7C417 338 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 ADAM8P78325 824 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 UBE2UQ5VVX9 321 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 MEX3BQ6ZN04 569 aaKnown RBP7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 PRSS48Q7RTY5 328 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 COG8Q96MW5 612 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 NKIRAS2Q9NYR9 191 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZNF319Q9P2F9 582 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 MYRFQ9Y2G1 1151 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 EXOSC1Q9Y3B2 195 aaKnown RBP7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 A0A096LPE4 126 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 hCG_38984A0A1B0GV85 526 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 A0A1W2PPZ6 126 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 RAB36O95755 333 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 LYNP07948 512 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 JUNBP17275 347 aaPredicted RBP7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 CD53P19397 219 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 SSTR2P30874 369 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 ETV1P50549 477 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 GPR50Q13585 617 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 LRRC36Q1X8D7 754 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 TMEM108Q6UXF1 575 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 UBE2J2Q8N2K1 259 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 C1orf159Q96HA4 380 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 PGLYRP3Q96LB9 341 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 DHRS9Q9BPW9 319 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 SLCO1C1Q9NYB5 712 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 AASSQ9UDR5 926 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 R4GMQ9 66 aa7.12□□□□□ -1.27
CDC42SE2-208ENST00000505065 PRSS44E7EML9 344 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms