RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 GSX2Q9BZM3 304 aa15.02□□□□□ -0.01
PCDHA1-203ENST00000504120 GPR84Q9NQS5 396 aa15.02□□□□□ -0.01
PCDHA1-203ENST00000504120 RPH3ALQ9UNE2 315 aa15.02□□□□□ -0.01
PCDHA1-203ENST00000504120 SHANK3Q9BYB0 1731 aa15.02□□□□□ -0.01
PCDHA1-203ENST00000504120 CCSO14618 274 aa15.02□□□□□ -0.01
PCDHA1-203ENST00000504120 HS3ST1O14792 307 aa15.02□□□□□ -0.01
PCDHA1-203ENST00000504120 SUMO3P55854 103 aaPredicted RBP15.02□□□□□ -0.01
PCDHA1-203ENST00000504120 OR52N5Q8NH56 324 aa15.02□□□□□ -0.01
PCDHA1-203ENST00000504120 C8orf44Q96CB5 159 aa15.02□□□□□ -0.01
PCDHA1-203ENST00000504120 SSUH2Q9Y2M2 353 aa15.02□□□□□ -0.01
PCDHA1-203ENST00000504120 PCYT1BQ9Y5K3 369 aaPredicted RBP15.02□□□□□ -0.01
PCDHA1-203ENST00000504120 TBPP20226 339 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 NFYBP25208 207 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 RHOUQ7L0Q8 258 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 CMTM4Q8IZR5 234 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 ZNF687Q8N1G0 1237 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 ANKRD53Q8N9V6 530 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 NUMA1Q14980 2115 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 ZNF831Q5JPB2 1677 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 EVPLQ92817 2033 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 LILRA5A6NI73 299 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 XRCC2O43543 280 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 PCK2Q16822 640 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 AVPI1Q5T686 147 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 H2BFWTQ7Z2G1 175 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 TEX19Q8NA77 164 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 ZNF2Q9BSG1 426 aaPredicted RBP15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 MENTQ9BUN1 341 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 ERVMER34-1Q9H9K5 563 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 SMCO4Q9NRQ5 59 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 PMS2P1A4D2B8 440 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 ANKRD61A6NGH8 418 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 ADRA2CP18825 462 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 STAC2Q6ZMT1 411 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 OR2AE1Q8NHA4 323 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 SIGLEC11Q96RL6 698 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 ATF6BQ99941 703 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 CDK5RAP2Q96SN8 1893 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 TMEM235A6NFC5 223 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 NUDT19A8MXV4 375 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 EFSO43281 561 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 ZGLP1P0C6A0 271 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 OR10K2Q6IF99 312 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 C15orf54Q8N8G6 183 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 SPNS1Q9H2V7 528 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 CDC20Q12834 499 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 ASTLQ6HA08 431 aaPredicted RBP15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 OR2G3Q8NGZ4 309 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 TTC9Q92623 222 aa15.01□□□□□ -0.01
PCDHA1-203ENST00000504120 IMPA2O14732 288 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 CLN5O75503 358 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 EIF4EP06730 217 aaKnown RBP15□□□□□ -0.01
PCDHA1-203ENST00000504120 SHBQ15464 509 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 C2orf76Q3KRA6 126 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 TIGD3Q6B0B8 471 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 OR51H1Q8NH63 302 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 PBOV1Q9GZY1 135 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 PLK3Q9H4B4 646 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 PURGQ9UJV8 347 aaKnown RBP15□□□□□ -0.01
PCDHA1-203ENST00000504120 DLEC1Q9Y238 1755 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 RPA2P15927 270 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 GFERP55789 205 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 SLC10A1Q14973 349 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 LAIR1Q6GTX8 287 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 SPEM1Q8N4L4 309 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 OR13C5Q8NGS8 318 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 FYTTD1Q96QD9 318 aaKnown RBP15□□□□□ -0.01
PCDHA1-203ENST00000504120 PPIL1Q9Y3C6 166 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 XIRP1Q702N8 1843 aaKnown RBP15□□□□□ -0.01
PCDHA1-203ENST00000504120 SPTY2D1-AS1A0A0U1RR47 76 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 OR2J2O76002 312 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 NRASP01111 189 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 ZNF85Q03923 595 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 TESK1Q15569 626 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 USP51Q70EK9 711 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 TMPRSS7Q7RTY8 843 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 OR5AS1Q8N127 324 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 KCNRGQ8N5I3 272 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 TXN2Q99757 166 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 MED29Q9NX70 200 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 GNG13Q9P2W3 67 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 CSAG2Q9Y5P2 127 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 SH2D1BO14796 132 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 GPR3P46089 330 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 LGALS4P56470 323 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 FZD2Q14332 565 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 AGERQ15109 404 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 KIRREL2Q6UWL6 708 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 SPNS2Q8IVW8 549 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 FGF14Q92915 247 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 ARHGDIGQ99819 225 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 HDGFL3Q9Y3E1 203 aa15□□□□□ -0.01
PCDHA1-203ENST00000504120 NXPH3O95157 252 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 APOA2P02652 100 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 OR10A3P58181 314 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 ZNF573Q86YE8 665 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 ZNF784Q8NCA9 323 aaPredicted RBP14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 ZNF385DQ9H6B1 395 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 ZNF355PQ9NSJ1 428 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms