RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 NUBPLQ8TB37 319 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CD99L2Q8TCZ2 262 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 RXFP4Q8TDU9 374 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM106AQ96A25 262 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 PGLYRP2Q96PD5 576 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 MED10Q9BTT4 135 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SMG9Q9H0W8 520 aaKnown RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 UBE2ZQ9H832 354 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 WDR54Q9H977 334 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ACKR4Q9NPB9 350 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CHST11Q9NPF2 352 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 YIPF1Q9Y548 306 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 WNT6Q9Y6F9 365 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 POLQO75417 2590 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 TCRBV21S2A2A0A5A6 115 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CDRT15L2A8MXV6 281 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 NPIPB11E5RHQ5 1161 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 RPL36A-HNRNPH2H7BZ11 118 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 KCNAB3O43448 404 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SRPX2O60687 465 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CD79AP11912 226 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF44P15621 663 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 HNF1AP20823 631 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 MMP16P51512 607 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 RABGGTBP53611 331 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 DGCR2P98153 550 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZP4Q12836 540 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ELAVL3Q14576 367 aaKnown RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF266Q14584 549 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SLC5A12Q1EHB4 618 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 PIP5KL1Q5T9C9 394 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 DMKNQ6E0U4 476 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SFRP4Q6FHJ7 346 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 FBXO42Q6P3S6 717 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TMCO2Q7Z6W1 182 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SLC35F2Q8IXU6 374 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 GPR135Q8IZ08 494 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 PNLDC1Q8NA58 520 aaKnown RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 PLPP5Q8NEB5 264 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 OR52J3Q8NH60 311 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 KCNE4Q8WWG9 221 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ASB17Q8WXJ9 295 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 DIO2Q92813 273 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 HLA-CQ95604 372 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 GNPNAT1Q96EK6 184 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 C16orf58Q96GQ5 468 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 C20orf144Q9BQM9 153 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SLC35A5Q9BS91 424 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TRMT61BQ9BVS5 477 aaKnown RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CNTNAP3Q9BZ76 1288 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CIPCQ9C0C6 399 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 C1orf198Q9H425 327 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 RERGLQ9H628 205 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 GPR173Q9NS66 373 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CKLFQ9UBR5 152 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 MAP4K5Q9Y4K4 846 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 INSL6Q9Y581 213 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TPRP12270 2363 aaKnown RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CPED1A4D0V7 1026 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF736B4DX44 427 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF354AO60765 605 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 GLSO94925 669 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 NUDT14O95848 222 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 OR8U8P0C7N1 319 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF286BP0CG31 522 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 FOLR1P15328 257 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF25P17030 456 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 AMD1P17707 334 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CCR2P41597 374 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 RGRP47804 291 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 KHKP50053 298 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SULT1A1P50225 295 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TAS2R20P59543 309 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TGM3Q08188 693 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 FUT5Q11128 374 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CLINT1Q14677 625 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 GFOD2Q3B7J2 385 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 MESTQ5EB52 335 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 OR2G6Q5TZ20 316 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 PWWP2BQ6NUJ5 590 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 JMJD6Q6NYC1 403 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 MTFR2Q6P444 385 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 LANCL3Q6ZV70 420 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 COX8CQ7Z4L0 72 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 AMZ2Q86W34 360 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF573Q86YE8 665 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 NRMQ8IXM6 262 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 HORMAD2Q8N7B1 307 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 MDGA1Q8NFP4 955 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 STEAP2Q8NFT2 490 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 C16orf78Q8WTQ4 265 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SNX33Q8WV41 574 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ABHD14BQ96IU4 210 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ARHGDIGQ99819 225 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 LMF2Q9BU23 707 aaKnown RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ACPTQ9BZG2 426 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 LYRM4Q9HD34 91 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 RAB18Q9NP72 206 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CMC2Q9NRP2 79 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CLEC2DQ9UHP7 191 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms