RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ACTA2P62736 377 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 ACTG2P63267 376 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 ACTC1P68032 377 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 ACTA1P68133 377 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 SLAMF1Q13291 335 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 HERPUD1Q15011 391 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 NRF1Q16656 503 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 C5orf64Q2M2E5 130 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 NSUN5P1Q3KNT7 163 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 VAX1Q5SQQ9 334 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 MARCH8Q5T0T0 291 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 OTPQ5XKR4 325 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 DUPD1Q68J44 220 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 RWDD4Q6NW29 188 aaKnown RBP1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 FAHD1Q6P587 224 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 DUX4L9Q6RFH8 374 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 Q6ZN92 141 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 SSX7Q7RTT5 188 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 DCXRQ7Z4W1 244 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 TMEM150AQ86TG1 271 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 SETD3Q86TU7 594 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 LHFPL3Q86UP9 236 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 UNC93AQ86WB7 457 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 PIANPQ8IYJ0 282 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 RDH10Q8IZV5 341 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 VKORC1L1Q8N0U8 176 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 KRT222Q8N1A0 295 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 PRELID2Q8N945 189 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 DUSP18Q8NEJ0 188 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 VN1R2Q8NFZ6 395 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR51F2Q8NH61 342 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR8D1Q8WZ84 308 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 ANKRD7Q92527 254 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 DCUN1D4Q92564 292 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 NDRG1Q92597 394 aaKnown RBP1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 FRAT1Q92837 279 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 FGF11Q92914 225 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 CMTM7Q96FZ5 175 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 SERPINB12Q96P63 405 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR5B12Q96R08 314 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 HIST1H4GQ99525 98 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 ARHGDIGQ99819 225 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 UTP23Q9BRU9 249 aaKnown RBP1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 TIMM29Q9BSF4 260 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 CALN1Q9BXU9 219 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 HES7Q9BYE0 225 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 SELENOIQ9C0D9 397 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 POLR2J2Q9GZM3 115 aaKnown RBP1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 POLR2J3Q9H1A7 115 aaKnown RBP1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR51J1Q9H342 316 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 TMEM38AQ9H6F2 299 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 CWH43Q9H720 699 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZDHHC11Q9H8X9 412 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 ACP6Q9NPH0 428 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 CTPS2Q9NRF8 586 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 ABCB10Q9NRK6 738 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 EXD2Q9NVH0 621 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 RMND1Q9NWS8 449 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 KCNIP1Q9NZI2 227 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 VAPAQ9P0L0 249 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 DUX4Q9UBX2 424 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 HMGXB4Q9UGU5 601 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 BTNL2Q9UIR0 455 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 GNPTGQ9UJJ9 305 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 NXT1Q9UKK6 140 aaKnown RBP1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 MMP17Q9ULZ9 603 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 UGT2A1Q9Y4X1 527 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 TSSC4Q9Y5U2 329 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 CHD4Q14839 1912 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 COL16A1Q07092 1604 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 TDRD6O60522 2096 aaKnown RBP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 RAI1Q7Z5J4 1906 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 IGKV1D-8A0A087WSZ0 117 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 A0A0A6YYD5 115 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 A0A0B4J2A0 478 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 PSMB11A5LHX3 300 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 A6NDN8 102 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 GOLGA6L10A6NI86 522 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 TMEM210A6NLX4 147 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 HACD1B0YJ81 288 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 SEC14L6B5MCN3 397 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 PRAMEF26H0Y7S4 382 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 KLRC4-KLRK1H3BQV0 150 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 PLPP3O14495 311 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 LIN7AO14910 233 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 TOX3O15405 576 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 RAD51CO43502 376 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 SNAI2O43623 268 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 GATCO43716 136 aaKnown RBP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 ICOSLGO75144 302 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 ALOX12BO75342 701 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 AQP8O94778 261 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 SUPT7LO94864 414 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 SNAPINO95295 136 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 TDP2O95551 362 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 GCGP01275 180 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 CATP04040 527 aaKnown RBP1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 ARG1P05089 322 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 SLC35E2BP0CK96 405 aa1.68□□□□□ -2.14
HMGB1P35-201ENST00000503360 SMIM10L1P0DMW3 83 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms