RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 GSSP48637 474 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 TAF6P49848 677 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 LIM2P55344 173 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 GLO1Q04760 184 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 GPR17Q13304 367 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 OR5I1Q13606 314 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 DGUOKQ16854 277 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 ATP6V1FQ16864 119 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 KRTAP15-1Q3LI76 137 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF672Q499Z4 452 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 SIRPB2Q5JXA9 342 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 WDR25Q64LD2 544 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 ADAM5Q6NVV9 412 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 DNAJC24Q6P3W2 148 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 FAHD1Q6P587 224 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 FAM199XQ6PEV8 388 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 DUX4L9Q6RFH8 374 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 LCLAT1Q6UWP7 414 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 PGAP1Q75T13 922 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 CMC1Q7Z7K0 106 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 PIP4P1Q86T03 277 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 NT5DC3Q86UY8 548 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 LIX1Q8N485 282 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 TMEM156Q8N614 296 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF441Q8N8Z8 693 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 NRACQ8N912 160 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 OR51F2Q8NH61 342 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF564Q8TBZ8 553 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 MRAPQ8TCY5 172 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 IFT81Q8WYA0 676 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 NDRG1Q92597 394 aaKnown RBP3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 CAPZA3Q96KX2 299 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 MS4A4EQ96PG1 132 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 PPP1R2P1Q96PQ5 205 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 MICU1Q9BPX6 476 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 FGFBP2Q9BYJ0 223 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 SLC29A3Q9BZD2 475 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 TMPRSS5Q9H3S3 457 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 RBKSQ9H477 322 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 ATP13A3Q9H7F0 1226 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 SIX2Q9NPC8 291 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 MRPL40Q9NQ50 206 aaKnown RBP3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 OCIAD1Q9NX40 245 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 GALPQ9UBC7 116 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 DUX4Q9UBX2 424 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 WARS2Q9UGM6 360 aaKnown RBP3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 CFL2Q9Y281 166 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 NTNG1Q9Y2I2 539 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 KIAA1671Q9BY89 1806 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 LOXHD1Q8IVV2 1947 aa3.6□□□□□ -1.83
HMGB1P21-201ENST00000502313 ASPMQ8IZT6 3477 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 BCLAF3A2AJT9 711 aaKnown RBP3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 PSMB11A5LHX3 300 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 C11orf98E9PRG8 122 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 hCG_2039718K7EN88 272 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 SULT1C2O00338 296 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 PIRO00625 290 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 INPP4BO15327 924 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 PROSCO94903 275 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 GLUD1P00367 558 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 NGFP01138 241 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 SERPINA5P05154 406 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 CTXN2P0C2S0 81 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 RNH1P13489 461 aaKnown RBP3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 COX5AP20674 150 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 SDC4P31431 198 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 DDOSTP39656 456 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 RFC3P40938 356 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 TUFMP49411 452 aaKnown RBP3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 GLUD2P49448 558 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 SERPINB8P50452 374 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 POLR2GP62487 172 aaKnown RBP eCLIP3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 VSNL1P62760 191 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 MRPS21P82921 87 aaKnown RBP3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 GGTLC2Q14390 218 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 OR4D1Q15615 310 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNHIT3Q15649 155 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 C5orf64Q2M2E5 130 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 ACTBL2Q562R1 376 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 TTMPQ5BVD1 217 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 TFDP3Q5H9I0 405 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF549Q6P9A3 640 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 PRSS57Q6UWY2 283 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 AHSA2Q719I0 299 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 TIPARPQ7Z3E1 657 aaKnown RBP3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 TMEM25Q86YD3 366 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 MTURNQ8N3F0 131 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 PRELID2Q8N945 189 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 MDS2Q8NDY4 140 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 OR5D18Q8NGL1 313 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 OR5K2Q8NHB8 316 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 TMED6Q8WW62 240 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 TRUB1Q8WWH5 349 aaKnown RBP3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 OR8D1Q8WZ84 308 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 STMN2Q93045 179 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 CELF6Q96J87 481 aaKnown RBP3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 DNAJC1Q96KC8 554 aaKnown RBP3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 SERPINB12Q96P63 405 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 TBX15Q96SF7 602 aa3.59□□□□□ -1.83
HMGB1P21-201ENST00000502313 CYP2S1Q96SQ9 504 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms