RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 WACQ9BTA9 647 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 RABEP2Q9H5N1 569 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 TMBIM4Q9HC24 238 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 CLN8Q9UBY8 286 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 BAG5Q9UL15 447 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 RNF114Q9Y508 228 aa12.23□□□□□ -0.45
TRAF4-212ENST00000498540 OR6C6A6NF89 314 aa12.22□□□□□ -0.45
TRAF4-212ENST00000498540 FBP2O00757 339 aa12.22□□□□□ -0.45
TRAF4-212ENST00000498540 PHYHO14832 338 aa12.22□□□□□ -0.45
TRAF4-212ENST00000498540 SRP9P49458 86 aaKnown RBP12.22□□□□□ -0.45
TRAF4-212ENST00000498540 ZNF181Q2M3W8 571 aa12.22□□□□□ -0.45
TRAF4-212ENST00000498540 RABL3Q5HYI8 236 aa12.22□□□□□ -0.45
TRAF4-212ENST00000498540 FBXW12Q6X9E4 464 aa12.22□□□□□ -0.45
TRAF4-212ENST00000498540 ZNF841Q6ZN19 808 aa12.22□□□□□ -0.45
TRAF4-212ENST00000498540 ZNF620Q6ZNG0 422 aa12.22□□□□□ -0.45
TRAF4-212ENST00000498540 BHLHE23Q8NDY6 225 aa12.22□□□□□ -0.45
TRAF4-212ENST00000498540 C19orf18Q8NEA5 215 aa12.22□□□□□ -0.45
TRAF4-212ENST00000498540 OR13G1Q8NGZ3 307 aa12.22□□□□□ -0.45
TRAF4-212ENST00000498540 LRRC8CQ8TDW0 803 aa12.22□□□□□ -0.45
TRAF4-212ENST00000498540 MAGEB18Q96M61 343 aa12.22□□□□□ -0.45
TRAF4-212ENST00000498540 ADAM18Q9Y3Q7 739 aa12.22□□□□□ -0.45
TRAF4-212ENST00000498540 LRRC30A6NM36 301 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 TNFRSF13BO14836 293 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-212ENST00000498540 ENSAO43768 121 aaKnown RBP12.21□□□□□ -0.45
TRAF4-212ENST00000498540 FSTL3O95633 263 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 CTLA4P16410 223 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 CFHR2P36980 270 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 BPIFB3P59826 476 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 HOXA4Q00056 320 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-212ENST00000498540 AQP6Q13520 282 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 PDCD1Q15116 288 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 TAF9Q16594 264 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 CCDC92Q53HC0 331 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-212ENST00000498540 TTMPQ5BVD1 217 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 MESTQ5EB52 335 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 CALHM3Q86XJ0 350 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 NRMQ8IXM6 262 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 PCYOX1LQ8NBM8 494 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 OR13C2Q8NGS9 318 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 OR1F12Q8NHA8 337 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 LINC01006Q8NI28 216 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 FAM71F1Q96KD3 344 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-212ENST00000498540 ZNF582Q96NG8 517 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-212ENST00000498540 SLC30A2Q9BRI3 323 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 ASH2LQ9UBL3 628 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 A4GNTQ9UNA3 340 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 POMT1Q9Y6A1 747 aa12.21□□□□□ -0.45
TRAF4-212ENST00000498540 TEX13CA0A0J9YWL9 993 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 SLC22A31A6NKX4 558 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 J3QW42 95 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 GPR137BO60478 399 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 CLPXO76031 633 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 HLA-DPB1P04440 258 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 MMP9P14780 707 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 PRSS12P56730 875 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 PROK1P58294 105 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 ST3GAL3Q11203 375 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 HIST2H2BDQ6DRA6 164 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 NANOGP8Q6NSW7 305 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 DCDC5Q6ZRR9 648 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 OAFQ86UD1 273 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 C1orf87Q8N0U7 546 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 SSMEM1Q8WWF3 244 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 DYRK2Q92630 601 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 RASD2Q96D21 266 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 PRRC1Q96M27 445 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 Q96M85 177 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 TBX15Q96SF7 602 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 WDR76Q9H967 626 aa12.2□□□□□ -0.46
TRAF4-212ENST00000498540 CENPVL3A0A0U1RRI6 287 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 IQCF6A8MYZ5 107 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 EFCAB9A8MZ26 197 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 ZNF879B4DU55 563 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 RER1O15258 196 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 IGHV4-59P01825 116 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 ZNF26P17031 533 aaPredicted RBP12.19□□□□□ -0.46
TRAF4-212ENST00000498540 PSMB10P40306 273 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 RGS6P49758 472 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 RPL15P61313 204 aaKnown RBP12.19□□□□□ -0.46
TRAF4-212ENST00000498540 LRRC23Q53EV4 343 aaPredicted RBP12.19□□□□□ -0.46
TRAF4-212ENST00000498540 CYBRD1Q53TN4 286 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 OR5L1Q8NGL2 311 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 TECTBQ96PL2 329 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 TCF7L1Q9HCS4 588 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 RHCGQ9UBD6 479 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 GRHPRQ9UBQ7 328 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 CTSZQ9UBR2 303 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 TMCC3Q9ULS5 477 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 ZNF281Q9Y2X9 895 aa12.19□□□□□ -0.46
TRAF4-212ENST00000498540 A0A1B0GWJ7 208 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 PRSS37A4D1T9 235 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 HTR3EA5X5Y0 456 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 FXYD1O00168 92 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 P2RY10O00398 339 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 CDC42EP2O14613 210 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 IMPA2O14732 288 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 FAM20BO75063 409 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 TOX4O94842 621 aa12.18□□□□□ -0.46
TRAF4-212ENST00000498540 RPL4P36578 427 aaKnown RBP12.18□□□□□ -0.46
TRAF4-212ENST00000498540 GATA4P43694 442 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms