RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 LRP12Q9Y561 859 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 COL12A1Q99715 3063 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 ATP6V1G2-DDX39BF2Z307 99 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 ABCD4O14678 606 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 MYL12BO14950 172 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 MAGEB4O15481 346 aaPredicted RBP11.77□□□□□ -0.53
CPNE1-227ENST00000498056 CRYAAP02489 173 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 KRT8P05787 483 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 COX5BP10606 129 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 EPXP11678 715 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 CD40P25942 277 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 DCKP27707 260 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 OPRL1P41146 370 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 CX3CR1P49238 355 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 PRKXP51817 358 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 ACTA2P62736 377 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 GRB2P62993 217 aaKnown RBP11.77□□□□□ -0.53
CPNE1-227ENST00000498056 ACTG2P63267 376 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 NAAAQ02083 359 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 MVKQ03426 396 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 TP53I3Q53FA7 332 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 PLEKHG7Q6ZR37 379 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 LHFPL3Q86UP9 236 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.77□□□□□ -0.53
CPNE1-227ENST00000498056 ZNF283Q8N7M2 679 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 FAM169BQ8N8A8 192 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 YIPF7Q8N8F6 280 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 MYDGFQ969H8 173 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 SPTSSAQ969W0 71 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 MRPL48Q96GC5 212 aaKnown RBP11.77□□□□□ -0.53
CPNE1-227ENST00000498056 RADILQ96JH8 1075 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 MROQ9BYG7 248 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 CCDC90BQ9GZT6 254 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 SLC24A3Q9HC58 644 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 FGF20Q9NP95 211 aaPredicted RBP11.77□□□□□ -0.53
CPNE1-227ENST00000498056 INPP5EQ9NRR6 644 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 MRPS18AQ9NVS2 196 aaKnown RBP11.77□□□□□ -0.53
CPNE1-227ENST00000498056 CHCHD3Q9NX63 227 aaKnown RBP11.77□□□□□ -0.53
CPNE1-227ENST00000498056 ERVK13-1Q9NX77 482 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 SLCO1C1Q9NYB5 712 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 GNG8Q9UK08 70 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 GTF2A1LQ9UNN4 478 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 LRRC42Q9Y546 428 aa11.77□□□□□ -0.53
CPNE1-227ENST00000498056 RAI1Q7Z5J4 1906 aaPredicted RBP11.77□□□□□ -0.53
CPNE1-227ENST00000498056 LOC100509620A0A075B734 347 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 IGHV2OR16-5A0A0B4J2B6 119 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 F5H5K5 113 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 J3QRE1 110 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 M0R135 149 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 SIAH2O43255 324 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 RGS10O43665 173 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 ABHD16AO95870 558 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 CDK1P06493 297 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 CD3EP07766 207 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 ADRA2AP08913 450 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 PTAFRP25105 342 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 CALCRP30988 508 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 RIDAP52758 137 aaKnown RBP11.76□□□□□ -0.53
CPNE1-227ENST00000498056 NR1H2P55055 460 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 GABARAPL2P60520 117 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 PSMA6P60900 246 aaKnown RBP11.76□□□□□ -0.53
CPNE1-227ENST00000498056 SLC35A2P78381 396 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 HGFACQ04756 655 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 EGR3Q06889 387 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 ECH1Q13011 328 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 C3orf36Q3SXR2 165 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 SLC22A25Q6T423 547 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 PAQR4Q8N4S7 273 aaPredicted RBP11.76□□□□□ -0.53
CPNE1-227ENST00000498056 KBTBD8Q8NFY9 601 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 OR1J2Q8NGS2 313 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 IPCEF1Q8WWN9 437 aaPredicted RBP11.76□□□□□ -0.53
CPNE1-227ENST00000498056 ZNF799Q96GE5 643 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 POM121L2Q96KW2 1035 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 DOK1Q99704 481 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 BRD7Q9NPI1 651 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 ACOXLQ9NUZ1 547 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 FKBP14Q9NWM8 211 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 ERVK-18Q9QC07 812 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 PLEKHB1Q9UF11 243 aaPredicted RBP11.76□□□□□ -0.53
CPNE1-227ENST00000498056 POU2F3Q9UKI9 436 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 GRIP1Q9Y3R0 1128 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 PTPN13Q12923 2485 aa11.76□□□□□ -0.53
CPNE1-227ENST00000498056 DPRXA6NFQ7 191 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 DEFB108AA8MXU0 73 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 RPP14O95059 124 aaKnown RBP11.75□□□□□ -0.53
CPNE1-227ENST00000498056 MT-ND2P03891 347 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 ANXA2P07355 339 aaKnown RBP11.75□□□□□ -0.53
CPNE1-227ENST00000498056 FAM157BP0CG42 384 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 LIMS3P0CW19 117 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 LIMS4P0CW20 117 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 SLC2A1P11166 492 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 COL8A1P27658 744 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 ETV1P50549 477 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 CHN2P52757 468 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 TPTEP56180 551 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 SNTB2Q13425 540 aaKnown RBP11.75□□□□□ -0.53
CPNE1-227ENST00000498056 ZNF829Q3KNS6 432 aaPredicted RBP11.75□□□□□ -0.53
CPNE1-227ENST00000498056 CDONQ4KMG0 1287 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 NCMAPQ5T1S8 102 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 RFPL4BQ6ZWI9 263 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms