RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 SLC2A10O95528 541 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 CYB5R3P00387 301 aaPredicted RBP13.67□□□□□ -0.22
VIM-208ENST00000497849 OPN1SWP03999 348 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 NCK1P16333 377 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 CFHR2P36980 270 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 PITPNBP48739 271 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 PCBP3P57721 371 aaKnown RBP13.67□□□□□ -0.22
VIM-208ENST00000497849 OR2T12Q8NG77 320 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 CLPTM1LQ96KA5 538 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 TBX15Q96SF7 602 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 CADM1Q9BY67 442 aaKnown RBP13.67□□□□□ -0.22
VIM-208ENST00000497849 OR2H1Q9GZK4 316 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 ELOVL3Q9HB03 270 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 SPAG4Q9NPE6 437 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 NANSQ9NR45 359 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 MAN2C1Q9NTJ4 1040 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 ACOXLQ9NUZ1 547 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 ANGPT4Q9Y264 503 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 ELOVL7A1L3X0 281 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 TRMUO75648 421 aaKnown RBP13.66□□□□□ -0.22
VIM-208ENST00000497849 ASAH2BP0C7U1 165 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 MMP9P14780 707 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 KITLGP21583 273 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 ERFP50548 548 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 ARHGDIAP52565 204 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 TAF11Q15544 211 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 ZNF404Q494X3 552 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 WDR25Q64LD2 544 aaPredicted RBP13.66□□□□□ -0.22
VIM-208ENST00000497849 ZNF841Q6ZN19 808 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 LDLRAD3Q86YD5 345 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 SMYD1Q8NB12 490 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 OR8B3Q8NGG8 313 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 VANGL1Q8TAA9 524 aaPredicted RBP13.66□□□□□ -0.22
VIM-208ENST00000497849 ASB10Q8WXI3 467 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 NMD3Q96D46 503 aaKnown RBP13.66□□□□□ -0.22
VIM-208ENST00000497849 OR8B2Q96RD0 313 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 KCTD14Q9BQ13 255 aaPredicted RBP13.66□□□□□ -0.22
VIM-208ENST00000497849 THTPAQ9BU02 230 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 MMADHCQ9H3L0 296 aaPredicted RBP13.66□□□□□ -0.22
VIM-208ENST00000497849 CLN8Q9UBY8 286 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 CD300AQ9UGN4 299 aa13.66□□□□□ -0.22
VIM-208ENST00000497849 PRPF19Q9UMS4 504 aaKnown RBP13.66□□□□□ -0.22
VIM-208ENST00000497849 RRP15Q9Y3B9 282 aaKnown RBP13.66□□□□□ -0.22
VIM-208ENST00000497849 CENPBD1B2RD01 187 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 P2RY10O00398 339 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 GSTA4O15217 222 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 SURF4O15260 269 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 TSPAN9O75954 239 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 LYPD3O95274 346 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 THY1P04216 161 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 ACADSP16219 412 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 CRYBA2P53672 197 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 FMODQ06828 376 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 EGR3Q06889 387 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 SGCAQ16586 387 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 FAM201AQ5SY85 155 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 FAM27BQ5VT28 67 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 LYPD2Q6UXB3 125 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 GDPGP1Q6ZNW5 385 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 GATAD2BQ8WXI9 593 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 PPP1R14AQ96A00 147 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 TAMM41Q96BW9 452 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 CMBLQ96DG6 245 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 PCDHAC1Q9H158 963 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 AURKAIP1Q9NWT8 199 aaPredicted RBP13.65□□□□□ -0.22
VIM-208ENST00000497849 ZNF229Q9UJW7 825 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 AP3M1Q9Y2T2 418 aa13.65□□□□□ -0.22
VIM-208ENST00000497849 A0A0U1RQK1 487 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 ZNF816-ZNF321PA0A0X1KG74 233 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 ZNF879B4DU55 563 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 IFNL4K9M1U5 179 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 CXCR6O00574 342 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 PHYHO14832 338 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 CHP2O43745 196 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 ENSAO43768 121 aaKnown RBP13.64□□□□□ -0.23
VIM-208ENST00000497849 FSTL3O95633 263 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 F13BP05160 661 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 GSTM3P21266 225 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 FUT4P22083 530 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 UGT2B15P54855 530 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 OXLD1Q5BKU9 147 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 SAMD4BQ5PRF9 694 aaKnown RBP13.64□□□□□ -0.23
VIM-208ENST00000497849 C11orf87Q6NUJ2 197 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 ERICH5Q6P6B1 374 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 ZNF613Q6PF04 617 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 NLRC3Q7RTR2 1065 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 RANBP3LQ86VV4 465 aaPredicted RBP13.64□□□□□ -0.23
VIM-208ENST00000497849 ALDH16A1Q8IZ83 802 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 NSMAFQ92636 917 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 SPATA5L1Q9BVQ7 753 aa13.64□□□□□ -0.23
VIM-208ENST00000497849 IGHV1-69DA0A0B4J2H0 117 aa13.63□□□□□ -0.23
VIM-208ENST00000497849 BLOC1S5-TXNDC5H3BN57 136 aa13.63□□□□□ -0.23
VIM-208ENST00000497849 KPNA4O00629 521 aaPredicted RBP13.63□□□□□ -0.23
VIM-208ENST00000497849 GPR37O15354 613 aa13.63□□□□□ -0.23
VIM-208ENST00000497849 TOX4O94842 621 aa13.63□□□□□ -0.23
VIM-208ENST00000497849 IGHV1-69P01742 117 aa13.63□□□□□ -0.23
VIM-208ENST00000497849 LAP3P28838 519 aa13.63□□□□□ -0.23
VIM-208ENST00000497849 KDELR2P33947 212 aa13.63□□□□□ -0.23
VIM-208ENST00000497849 RPL18Q07020 188 aaKnown RBP13.63□□□□□ -0.23
VIM-208ENST00000497849 LRRC23Q53EV4 343 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms