RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, human

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-210	ENST00000497730	ANKRD12	Q6UB98	2062 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	TRAV19	A0A0A6YYK7	116 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	IGHV1OR15-9	A0A0B4J2B8	117 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	TRBV11-1	A0A0K0K1C0	115 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	CCDC169	A6NNP5	214 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	RPL36A-HNRNPH2	H7BZ11	118 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	AP3B1	O00203	1094 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	NVL	O15381	856 aa	Known RBP	3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	CHST1	O43916	411 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	ERLIN1	O75477	346 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	CLDN11	O75508	207 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	KRTAP5-8	O75690	187 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	IGKV1-17	P01599	117 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	IGLV3-19	P01714	112 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	IL4	P05112	153 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	CDC20	Q12834	499 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	IFT88	Q13099	833 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	ALKBH6	Q3KRA9	238 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	TCEAL5	Q5H9L2	206 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	AVPI1	Q5T686	147 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	CARD17	Q5XLA6	110 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	ZFP1	Q6P2D0	407 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	C12orf54	Q6X4T0	127 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	CDKL3	Q8IVW4	592 aa	Predicted RBP	3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	COX18	Q8N8Q8	333 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	CHST4	Q8NCG5	386 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	OR6N1	Q8NGY5	312 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	LILRB4	Q8NHJ6	448 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	LYPD6B	Q8NI32	183 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	LINC01560	Q8TB33	94 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	TCEAL3	Q969E4	200 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	SLC38A10	Q9HBR0	1119 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	ZNF160	Q9HCG1	818 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	RETN	Q9HD89	108 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	RABL2B	Q9UNT1	228 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	NINL	Q9Y2I6	1382 aa		3.1	□□□□□ -1.91
TRA2A-210	ENST00000497730	ZNF850	A8MQ14	1090 aa		3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730		H7C417	338 aa		3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730	NDUFAB1	O14561	156 aa		3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730	SCAMP2	O15127	329 aa	Known RBP	3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730	EIF4E2	O60573	245 aa	Known RBP	3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730	OR8U9	P0C7N5	309 aa		3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730	CXCL12	P48061	93 aa		3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730	CRISP1	P54107	249 aa		3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730	ZNF816	Q0VGE8	651 aa	Predicted RBP	3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730	TRAM2	Q15035	370 aa		3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730	SLC16A13	Q7RTY0	426 aa		3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730	OSR2	Q8N2R0	312 aa		3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730	OR52E2	Q8NGJ4	325 aa		3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730	CIRBP-AS1	Q8TBR5	109 aa		3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730	LZTS2	Q9BRK4	669 aa		3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730	MTFP1	Q9UDX5	166 aa		3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730	SLC17A4	Q9Y2C5	497 aa		3.09	□□□□□ -1.91
TRA2A-210	ENST00000497730	BRWD3	Q6RI45	1802 aa		3.09	□□□□□ -1.92
TRA2A-210	ENST00000497730	IGLV3-12	A0A075B6K2	115 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	TRBV9	A0A0B4J1U6	114 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730		H0YJW9	148 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730		K7EMT4	169 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	DNASE2	O00115	360 aa	Predicted RBP	3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	RAD51C	O43502	376 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	FLOT1	O75955	427 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	KRT14	P02533	472 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	DCN	P07585	359 aa	Known RBP	3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	CTSL	P07711	333 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	CT45A6	P0DMU7	189 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	CT45A5	P0DMU8	189 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	CT45A7	P0DMV0	189 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	MYL2	P10916	166 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	ATF6	P18850	670 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	GTF2E2	P29084	291 aa	Known RBP	3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	RGS8	P57771	180 aa	Predicted RBP	3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	CDK5	Q00535	292 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	LIPE	Q05469	1076 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	LRRC74A	Q0VAA2	488 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	CT45A1	Q5HYN5	189 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	AP1AR	Q63HQ0	302 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	TTC23L	Q6PF05	361 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	CENPQ	Q7L2Z9	268 aa	Predicted RBP	3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	NKAIN4	Q8IVV8	208 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	MYOCD	Q8IZQ8	938 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	NPW	Q8N729	165 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	OR11H7	Q8NGC8	314 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	CT45A3	Q8NHU0	189 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	FAM81A	Q8TBF8	368 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	OR51E1	Q8TCB6	317 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	DCPS	Q96C86	337 aa	Known RBP	3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	COL21A1	Q96P44	957 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	TIMM29	Q9BSF4	260 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	ULBP2	Q9BZM5	246 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	PTTG3P	Q9NZH4	202 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	MTCH1	Q9NZJ7	389 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	MARCO	Q9UEW3	520 aa	Predicted RBP	3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	YEATS2	Q9ULM3	1422 aa		3.08	□□□□□ -1.92
TRA2A-210	ENST00000497730	CTAGE15	A4D2H0	777 aa		3.07	□□□□□ -1.92
TRA2A-210	ENST00000497730	C5orf63	A6NC05	138 aa		3.07	□□□□□ -1.92
TRA2A-210	ENST00000497730	NCBP2L	A6PVI3	153 aa	Known RBP	3.07	□□□□□ -1.92
TRA2A-210	ENST00000497730	SOCS1	O15524	211 aa		3.07	□□□□□ -1.92
TRA2A-210	ENST00000497730	CHST10	O43529	356 aa		3.07	□□□□□ -1.92
TRA2A-210	ENST00000497730	HUS1	O60921	280 aa		3.07	□□□□□ -1.92
TRA2A-210	ENST00000497730	REM1	O75628	298 aa		3.07	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms