RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 TRIM64A6NGJ6 449 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 TRIM64BA6NI03 449 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 SAC3D1A6NKF1 404 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 H7C1Q1 480 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 INHBBP09529 407 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 CLUP10909 449 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 SLC25A16P16260 332 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 GSTT1P30711 240 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 TPTEP56180 551 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 TNK1Q13470 666 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 PCK2Q16822 640 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 PCGF3Q3KNV8 242 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 SPATA46Q5T0L3 261 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 TMEM236Q5W0B7 351 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 PLBD1Q6P4A8 553 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 TMEM154Q6P9G4 183 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 DNM1P46Q6ZS02 220 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 CXXC5Q7LFL8 322 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 ZNF511Q8NB15 262 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 KLF14Q8TD94 323 aaPredicted RBP16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 COX4I2Q96KJ9 171 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 PKP2Q99959 881 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 MED20Q9H944 212 aa16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 HINT3Q9NQE9 182 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-213ENST00000496785 H3BNX3 289 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 ZNF593O00488 134 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 CLPTM1O96005 669 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 NGFP01138 241 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 ALDH3B1P43353 468 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 RPS7P62081 194 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 PPP2R2BQ00005 443 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 DBPQ10586 325 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 MAD2L1BPQ15013 274 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 KLHL12Q53G59 568 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 LINC01590Q5TEZ4 76 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 LCN1P1Q5VSP4 162 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 SLX4IPQ5VYV7 408 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 DCXRQ7Z4W1 244 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 BIVMQ86UB2 503 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 CPOQ8IVL8 374 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 ZNF525Q8N782 197 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 OR6N2Q8NGY6 317 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 ZNRF4Q8WWF5 429 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 PTP4A1Q93096 173 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 CIB1Q99828 191 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 HCAR1Q9BXC0 346 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 WDR76Q9H967 626 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 MARCH7Q9H992 704 aa16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 DDX28Q9NUL7 540 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 MYEF2Q9P2K5 600 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-213ENST00000496785 LOC390937A0A1W2PQ73 354 aa16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 ZAR1LA6NP61 321 aa16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 ZNF878C9JN71 531 aa16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 MITFO75030 526 aaPredicted RBP16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 SLC15A1P46059 708 aa16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 RAD23AP54725 363 aa16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 GABPB1Q06547 395 aaPredicted RBP16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 TAF13Q15543 124 aa16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 FAM209AQ5JX71 171 aa16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 ERI1Q8IV48 349 aaKnown RBP16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 ZNF540Q8NDQ6 660 aa16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 SLC7A6Q92536 515 aa16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 MAP6Q96JE9 813 aa16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 DIRC2Q96SL1 478 aa16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 PIMREGQ9BSJ6 248 aa16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 REG4Q9BYZ8 158 aa16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 TPK1Q9H3S4 243 aa16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 S100A14Q9HCY8 104 aa16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 NKIRAS2Q9NYR9 191 aa16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 TMEFF2Q9UIK5 374 aaPredicted RBP16.48■□□□□ 0.23
CTDSP1-213ENST00000496785 HIVEP1P15822 2718 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 C17orf100A8MU93 164 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 F5H5K5 113 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 M0R135 149 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 TIMM8AO60220 97 aaPredicted RBP16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 APOC1P02654 83 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 DBHP09172 617 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 DAOP14920 347 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 RPS27P42677 84 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 EIF2B1Q14232 305 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 LYPD4Q6UWN0 246 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 RHOUQ7L0Q8 258 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 C10orf105Q8TEF2 133 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 UBASH3BQ8TF42 649 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 SLAMF6Q96DU3 332 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 ZNF799Q96GE5 643 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 COPS4Q9BT78 406 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 C9orf16Q9BUW7 83 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 C1QTNF5Q9BXJ0 243 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 GABARAPL3Q9BY60 117 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 TOR3AQ9H497 397 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 PNRC2Q9NPJ4 139 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 H2AFY2Q9P0M6 372 aaPredicted RBP16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 STARD10Q9Y365 291 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 CELSR1Q9NYQ6 3014 aa16.47■□□□□ 0.23
CTDSP1-213ENST00000496785 ACSM4P0C7M7 580 aa16.46■□□□□ 0.23
CTDSP1-213ENST00000496785 RAC2P15153 192 aa16.46■□□□□ 0.23
CTDSP1-213ENST00000496785 MPV17P39210 176 aa16.46■□□□□ 0.23
CTDSP1-213ENST00000496785 ZNF81P51508 661 aa16.46■□□□□ 0.23
CTDSP1-213ENST00000496785 GRB2P62993 217 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms