RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 HTR3EA5X5Y0 456 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 IQCF6A8MYZ5 107 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 RGS16O15492 202 aaPredicted RBP11.11□□□□□ -0.63
COL1A1-209ENST00000495677 MLNRO43193 412 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 SGCEO43556 437 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 CD247P20963 164 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 RGS6P49758 472 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 ERFP50548 548 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 COX10Q12887 443 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 HERPUD1Q15011 391 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 FAM201AQ5SY85 155 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 METTL11BQ5VVY1 283 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 MAVSQ7Z434 540 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 MOGAT3Q86VF5 341 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 OR5L1Q8NGL2 311 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 RASSF5Q8WWW0 418 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 SPDL1Q96EA4 605 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 DMRTB1Q96MA1 342 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 ZNF582Q96NG8 517 aaPredicted RBP11.11□□□□□ -0.63
COL1A1-209ENST00000495677 POLR2J2Q9GZM3 115 aaKnown RBP11.11□□□□□ -0.63
COL1A1-209ENST00000495677 POLR2J3Q9H1A7 115 aaKnown RBP11.11□□□□□ -0.63
COL1A1-209ENST00000495677 C20orf141Q9NUB4 165 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 ERVK-18Q9QC07 812 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 ATPIF1Q9UII2 106 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 RYR3Q15413 4870 aa11.11□□□□□ -0.63
COL1A1-209ENST00000495677 NDUFA2O43678 99 aa11.1□□□□□ -0.63
COL1A1-209ENST00000495677 DOK2O60496 412 aa11.1□□□□□ -0.63
COL1A1-209ENST00000495677 PRB2P02812 416 aaPredicted RBP11.1□□□□□ -0.63
COL1A1-209ENST00000495677 SCG5P05408 212 aa11.1□□□□□ -0.63
COL1A1-209ENST00000495677 IRF2P14316 349 aa11.1□□□□□ -0.63
COL1A1-209ENST00000495677 HTR5AP47898 357 aa11.1□□□□□ -0.63
COL1A1-209ENST00000495677 KCNJ8Q15842 424 aa11.1□□□□□ -0.63
COL1A1-209ENST00000495677 KRT71Q3SY84 523 aa11.1□□□□□ -0.63
COL1A1-209ENST00000495677 RUNDC3AQ59EK9 446 aa11.1□□□□□ -0.63
COL1A1-209ENST00000495677 ALG10Q5BKT4 473 aa11.1□□□□□ -0.63
COL1A1-209ENST00000495677 DHRS7BQ6IAN0 325 aaPredicted RBP11.1□□□□□ -0.63
COL1A1-209ENST00000495677 METAP1DQ6UB28 335 aaPredicted RBP11.1□□□□□ -0.63
COL1A1-209ENST00000495677 PATL1Q86TB9 770 aaKnown RBP11.1□□□□□ -0.63
COL1A1-209ENST00000495677 IGFN1Q86VF2 1251 aa11.1□□□□□ -0.63
COL1A1-209ENST00000495677 NKAIN4Q8IVV8 208 aa11.1□□□□□ -0.63
COL1A1-209ENST00000495677 OR5AS1Q8N127 324 aa11.1□□□□□ -0.63
COL1A1-209ENST00000495677 OR10AD1Q8NGE0 317 aa11.1□□□□□ -0.63
COL1A1-209ENST00000495677 PFN4Q8NHR9 129 aa11.1□□□□□ -0.63
COL1A1-209ENST00000495677 KCNK9Q9NPC2 374 aa11.1□□□□□ -0.63
COL1A1-209ENST00000495677 A0A0U1RQK1 487 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 A6NIZ1 184 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 F5H5P2 479 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 AHCYL1O43865 530 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 OPN1SWP03999 348 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 WDR4P57081 412 aaKnown RBP11.09□□□□□ -0.63
COL1A1-209ENST00000495677 RAP1BP61224 184 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 RAP1AP62834 184 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 EGR3Q06889 387 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 MAB21L1Q13394 359 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 OR2T2Q6IF00 324 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 C11orf88Q6PI97 169 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 DLEU7Q6UYE1 221 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 Q6ZTK2 550 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 CLDN22Q8N7P3 220 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 LRRC75AQ8NAA5 344 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 AENQ8WTP8 325 aaKnown RBP11.09□□□□□ -0.63
COL1A1-209ENST00000495677 TMEM239Q8WW34 195 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 CFHR4Q92496 578 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 LHX4Q969G2 390 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 PAIP2Q9BPZ3 127 aaKnown RBP11.09□□□□□ -0.63
COL1A1-209ENST00000495677 CPPED1Q9BRF8 314 aaPredicted RBP11.09□□□□□ -0.63
COL1A1-209ENST00000495677 TMEM100Q9NV29 134 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 ZNRD1Q9P1U0 126 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 CTSZQ9UBR2 303 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 VPREB3Q9UKI3 123 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 CAB39Q9Y376 341 aaPredicted RBP11.09□□□□□ -0.63
COL1A1-209ENST00000495677 USH1CQ9Y6N9 552 aa11.09□□□□□ -0.63
COL1A1-209ENST00000495677 A0A1W2PPL8 197 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 OR6C6A6NF89 314 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 RNASEK-C17orf49H0YIS7 233 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 ECDO95905 644 aaPredicted RBP11.08□□□□□ -0.64
COL1A1-209ENST00000495677 RAD23AP54725 363 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 STX1BP61266 288 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 LSM6P62312 80 aaKnown RBP11.08□□□□□ -0.64
COL1A1-209ENST00000495677 AQP6Q13520 282 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 ANKDD1AQ495B1 522 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 CLEC12AQ5QGZ9 265 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 INTS11Q5TA45 600 aaKnown RBP11.08□□□□□ -0.64
COL1A1-209ENST00000495677 SLC35E4Q6ICL7 350 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 EPGNQ6UW88 154 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 MREGQ8N565 214 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 SCCPDHQ8NBX0 429 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 TMEM255BQ8WV15 326 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 APOBEC3DQ96AK3 386 aaPredicted RBP11.08□□□□□ -0.64
COL1A1-209ENST00000495677 TECTBQ96PL2 329 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 TRIM36Q9NQ86 728 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 NECAP2Q9NVZ3 263 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 CCDC167Q9P0B6 97 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 TMCC3Q9ULS5 477 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 MED31Q9Y3C7 131 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 KPTNQ9Y664 436 aa11.08□□□□□ -0.64
COL1A1-209ENST00000495677 DNAH3Q8TD57 4116 aa11.07□□□□□ -0.64
COL1A1-209ENST00000495677 BTBD17A6NE02 478 aa11.07□□□□□ -0.64
COL1A1-209ENST00000495677 XPNPEP2O43895 674 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms