RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 UCK1Q9HA47 277 aa2.49□□□□□ -2.01
CD46-217ENST00000493796 ROPN1Q9HAT0 212 aaPredicted RBP2.49□□□□□ -2.01
CD46-217ENST00000493796 POPDC3Q9HBV1 291 aa2.49□□□□□ -2.01
CD46-217ENST00000493796 MID1IP1Q9NPA3 183 aa2.49□□□□□ -2.01
CD46-217ENST00000493796 MIEF1Q9NQG6 463 aa2.49□□□□□ -2.01
CD46-217ENST00000493796 DCAF16Q9NXF7 216 aa2.49□□□□□ -2.01
CD46-217ENST00000493796 CTSFQ9UBX1 484 aa2.49□□□□□ -2.01
CD46-217ENST00000493796 MARCOQ9UEW3 520 aaPredicted RBP2.49□□□□□ -2.01
CD46-217ENST00000493796 MTRF1LQ9UGC7 380 aaKnown RBP2.49□□□□□ -2.01
CD46-217ENST00000493796 RPH3AQ9Y2J0 694 aaPredicted RBP2.49□□□□□ -2.01
CD46-217ENST00000493796 ASB4Q9Y574 426 aa2.49□□□□□ -2.01
CD46-217ENST00000493796 KCNE3Q9Y6H6 103 aa2.49□□□□□ -2.01
CD46-217ENST00000493796 TLN1Q9Y490 2541 aaKnown RBP2.49□□□□□ -2.01
CD46-217ENST00000493796 GCN1Q92616 2671 aaKnown RBP2.49□□□□□ -2.01
CD46-217ENST00000493796 UBR5O95071 2799 aaPredicted RBP2.49□□□□□ -2.01
CD46-217ENST00000493796 FREM1Q5H8C1 2179 aa2.49□□□□□ -2.01
CD46-217ENST00000493796 ALPK2Q86TB3 2170 aa2.49□□□□□ -2.01
CD46-217ENST00000493796 GTF3C1Q12789 2109 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 IGLV8-61A0A075B6I0 122 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 A0A0A6YYD5 115 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 GSAPA4D1B5 854 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 TCP11X1B4DZS4 312 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 GPR89AB7ZAQ6 455 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 E5RI56 91 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 K7EPI3 171 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 DYNC1I1O14576 645 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 COPEO14579 308 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 EI24O14681 340 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 LSM1O15116 133 aaKnown RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 POLR3GO15318 223 aaPredicted RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 RGS16O15492 202 aaPredicted RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 CFLARO15519 480 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 EDF1O60869 148 aaKnown RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 RDH16O75452 317 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 SPAG6O75602 509 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 STK16O75716 305 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 C8GP07360 202 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 FGF4P08620 206 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 HIST1H2AGP0C0S8 130 aaPredicted RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 SLC35G4P0C7Q5 338 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 GPR89BP0CG08 455 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 RALBP11234 206 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 GNSP15586 552 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 RPS2P15880 293 aaKnown RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 ATP5A1P25705 553 aaKnown RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 MAPK3P27361 379 aaPredicted RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 CRABP2P29373 138 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 NUDT1P36639 197 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 SLC26A3P40879 764 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 CDKN2CP42773 168 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 ALDH3B2P48448 385 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 SERPINB9P50453 376 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 CASP9P55211 416 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 UCP2P55851 309 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 DNAJB13P59910 316 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 HERVK_113P63132 956 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 ACTN3Q08043 901 aaPredicted RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 FUT5Q11128 374 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 NAB1Q13506 487 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 TSTA3Q13630 321 aaPredicted RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 SELPLGQ14242 412 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 SLC5A12Q1EHB4 618 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 LINC00303Q3SY05 128 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 PAGE3Q5JUK9 113 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 HIST2H2AA3Q6FI13 130 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 SULT1C3Q6IMI6 304 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 WDR74Q6RFH5 385 aaPredicted RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 TSEN54Q7Z6J9 526 aaKnown RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 GKN2Q86XP6 184 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 RIMKLAQ8IXN7 391 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 PRSS58Q8IYP2 241 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 CA13Q8N1Q1 262 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 KIF2BQ8N4N8 673 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 CCNYL1Q8N7R7 359 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 MFSD9Q8NBP5 474 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 NFAM1Q8NET5 270 aaPredicted RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 OR4D9Q8NGE8 314 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 RFESDQ8TAC1 157 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 FNDC8Q8TC99 324 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 ACMSDQ8TDX5 336 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 CT55Q8WUE5 264 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 C10orf82Q8WW14 230 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 SLC5A11Q8WWX8 675 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.48□□□□□ -2.01
CD46-217ENST00000493796 HIST1H2ACQ93077 130 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 CIDECQ96AQ7 238 aaPredicted RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 TMEM159Q96B96 161 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 PPWD1Q96BP3 646 aaKnown RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 C8orf44Q96CB5 159 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 CXorf40BQ96DE9 158 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 MED8Q96G25 268 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 ZNF514Q96K75 400 aaPredicted RBP2.48□□□□□ -2.01
CD46-217ENST00000493796 PPP1R2P1Q96PQ5 205 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 SPXQ9BT56 116 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 ERVK-6Q9BXR3 956 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 EBPLQ9BY08 206 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 DRC3Q9H069 523 aa2.48□□□□□ -2.01
CD46-217ENST00000493796 RHBGQ9H310 441 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms