RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 SLC16A13Q7RTY0 426 aa1.96□□□□□ -2.1
SMC4-223ENST00000493695 CBLN2Q8IUK8 224 aa1.96□□□□□ -2.1
SMC4-223ENST00000493695 NECAP1Q8NC96 275 aa1.96□□□□□ -2.1
SMC4-223ENST00000493695 OR8U1Q8NH10 309 aa1.96□□□□□ -2.1
SMC4-223ENST00000493695 OR5K2Q8NHB8 316 aa1.96□□□□□ -2.1
SMC4-223ENST00000493695 COQ8AQ8NI60 647 aa1.96□□□□□ -2.1
SMC4-223ENST00000493695 ZNF461Q8TAF7 563 aa1.96□□□□□ -2.1
SMC4-223ENST00000493695 CAPSLQ8WWF8 208 aa1.96□□□□□ -2.1
SMC4-223ENST00000493695 MCUR1Q96AQ8 359 aa1.96□□□□□ -2.1
SMC4-223ENST00000493695 C8orf44Q96CB5 159 aa1.96□□□□□ -2.1
SMC4-223ENST00000493695 OR5B12Q96R08 314 aa1.96□□□□□ -2.1
SMC4-223ENST00000493695 MYCBPQ99417 103 aaPredicted RBP1.96□□□□□ -2.1
SMC4-223ENST00000493695 RNF5Q99942 180 aa1.96□□□□□ -2.1
SMC4-223ENST00000493695 SAMD10Q9BYL1 202 aa1.96□□□□□ -2.1
SMC4-223ENST00000493695 GEMIN7Q9H840 131 aaKnown RBP1.96□□□□□ -2.1
SMC4-223ENST00000493695 MARCOQ9UEW3 520 aaPredicted RBP1.96□□□□□ -2.1
SMC4-223ENST00000493695 INSRP06213 1382 aa1.96□□□□□ -2.1
SMC4-223ENST00000493695 PALLDQ8WX93 1383 aa1.96□□□□□ -2.1
SMC4-223ENST00000493695 COL27A1Q8IZC6 1860 aaPredicted RBP1.95□□□□□ -2.1
SMC4-223ENST00000493695 FHOD3Q2V2M9 1422 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 CTAGE15A4D2H0 777 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 HUS1O60921 280 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 FLOT1O75955 427 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 CCNE2O96020 404 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 MYL2P10916 166 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 CELP19835 753 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 STOMP27105 288 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 OPRK1P41145 380 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 SYKP43405 635 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 CXCL12P48061 93 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 RAB9AP51151 201 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 CRISP1P54107 249 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 SYNJ2BPP57105 145 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 RGS8P57771 180 aaPredicted RBP1.95□□□□□ -2.1
SMC4-223ENST00000493695 VSX2P58304 361 aaPredicted RBP1.95□□□□□ -2.1
SMC4-223ENST00000493695 UBE2NP61088 152 aaKnown RBP1.95□□□□□ -2.1
SMC4-223ENST00000493695 ZNF816Q0VGE8 651 aaPredicted RBP1.95□□□□□ -2.1
SMC4-223ENST00000493695 TRAM2Q15035 370 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 C1orf185Q5T7R7 199 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 GPR107Q5VW38 600 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 MBOAT1Q6ZNC8 495 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 BZW1Q7L1Q6 419 aaKnown RBP1.95□□□□□ -2.1
SMC4-223ENST00000493695 CMC1Q7Z7K0 106 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 HMGN2P46Q86SG4 172 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 CTAGE6Q86UF2 777 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 PRSS58Q8IYP2 241 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 METTL13Q8N6R0 699 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 PQLC3Q8N755 202 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 OR52E2Q8NGJ4 325 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 LYPD6BQ8NI32 183 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 TMEM230Q96A57 120 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 PTX4Q96A99 478 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 PANX1Q96RD7 426 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 TIMM17AQ99595 171 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 MICU1Q9BPX6 476 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 ZNF2Q9BSG1 426 aaPredicted RBP1.95□□□□□ -2.1
SMC4-223ENST00000493695 OSBPL11Q9BXB4 747 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 OR52D1Q9H346 318 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 SAMSN1Q9NSI8 373 aaKnown RBP1.95□□□□□ -2.1
SMC4-223ENST00000493695 RAB20Q9NX57 234 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 LYARQ9NX58 379 aaKnown RBP1.95□□□□□ -2.1
SMC4-223ENST00000493695 DCAF16Q9NXF7 216 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 DOCK9Q9BZ29 2069 aa1.95□□□□□ -2.1
SMC4-223ENST00000493695 IGLV2-18A0A075B6J9 118 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 KCNE1BA0A087WTH5 132 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 IGKV1-8A0A0C4DH67 115 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 H0YJW9 148 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 SGK1O00141 431 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 RAD51CO43502 376 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 CDH16O75309 829 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 CCNKO75909 580 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 RCBTB2O95199 551 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 HLA-DQA1P01909 254 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 ARG1P05089 322 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 C1GALT1C1LP0DN25 315 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 ERGP11308 486 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 CTRB1P17538 263 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 GGT1P19440 569 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 BCKDHBP21953 392 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 DTYMKP23919 212 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 OR1E1P30953 314 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 HCAR3P49019 387 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 P2RX1P51575 399 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 GFERP55789 205 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 PPP1CBP62140 327 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 CCNA1P78396 465 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 CDC20Q12834 499 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 COX19Q49B96 90 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 SMUG1Q53HV7 270 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 TTC23LQ6PF05 361 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 MBOAT2Q6ZWT7 520 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 CALHM3Q86XJ0 350 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 CALHM1Q8IU99 346 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 OSR2Q8N2R0 312 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 ARRDC1Q8N5I2 433 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 CHST4Q8NCG5 386 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 OR4K5Q8NGD3 323 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 CIRBP-AS1Q8TBR5 109 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 FLYWCH2Q96CP2 140 aaKnown RBP1.94□□□□□ -2.1
SMC4-223ENST00000493695 OR10C1Q96KK4 312 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms