RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	NPTX1	Q15818	432 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	CDON	Q4KMG0	1287 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	MTX3	Q5HYI7	312 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	ALG10B	Q5I7T1	473 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	FAM201A	Q5SY85	155 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	GCNT6	Q5T4J0	391 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	FAM69A	Q5T7M9	428 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	RNF220	Q5VTB9	566 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	MBNL2	Q5VZF2	373 aa	Known RBP	4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	TMEM53	Q6P2H8	277 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	TTC33	Q6PID6	262 aa	Predicted RBP	4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	CRIP3	Q6Q6R5	217 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	ARL9	Q6T311	187 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	ARMC8	Q8IUR7	673 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	PNKD	Q8N490	385 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	C11orf65	Q8NCR3	313 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	BEND2	Q8NDZ0	799 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	FAM71C	Q8NEG0	241 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	OR51G2	Q8NGK0	314 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	VANGL1	Q8TAA9	524 aa	Predicted RBP	4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	KLF14	Q8TD94	323 aa	Predicted RBP	4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	RORB	Q92753	470 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	MYDGF	Q969H8	173 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	LRR1	Q96L50	414 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	MAGEB18	Q96M61	343 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	OR2M2	Q96R28	347 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	OR2V2	Q96R30	315 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	ZNF649	Q9BS31	505 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	CCDC28B	Q9BUN5	200 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	CDCA4	Q9BXL8	241 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	OR2J1	Q9GZK6	312 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	C20orf27	Q9GZN8	174 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	SLC38A1	Q9H2H9	487 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	C1orf198	Q9H425	327 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	WDR55	Q9H6Y2	383 aa	Predicted RBP	4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	BCL2L10	Q9HD36	194 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	GCM1	Q9NP62	436 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	TCF7L2	Q9NQB0	619 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	SIRT7	Q9NRC8	400 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	SDR39U1	Q9NRG7	319 aa	Predicted RBP	4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	RLIM	Q9NVW2	624 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	ERVK-18	Q9QC07	812 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	EIF3K	Q9UBQ5	218 aa	Known RBP	4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	IL19	Q9UHD0	177 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	RAB21	Q9UL25	225 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	NDRG4	Q9ULP0	352 aa	Known RBP	4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	ANGPT4	Q9Y264	503 aa		4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	ZNF443	Q9Y2A4	671 aa	Predicted RBP	4.35	□□□□□ -1.71
SEC13-219	ENST00000492602		V9GYY5	206 aa	Predicted RBP	4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	DYNC1H1	Q14204	4646 aa	Known RBP	4.35	□□□□□ -1.71
SEC13-219	ENST00000492602	IQCM	A0A1B0GVH7	501 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602		A0A1B0GVI7	797 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602		A0A1W2PRG6	482 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	HTR3E	A5X5Y0	456 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	MEGF11	A6BM72	1044 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	GMNC	A6NCL1	334 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	F2RL2	O00254	374 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	SDHD	O14521	159 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	SURF4	O15260	269 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	MT-ATP6	P00846	226 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	PRG2	P13727	222 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	APLNR	P35414	380 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	ACAA2	P42765	397 aa	Known RBP	4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	CDKN2C	P42773	168 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	VDAC2	P45880	294 aa	Predicted RBP	4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	ZNF84	P51523	738 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	BMX	P51813	675 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	LUM	P51884	338 aa	Predicted RBP	4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	RGS8	P57771	180 aa	Predicted RBP	4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	CYP51A1	Q16850	503 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	LRRC75B	Q2VPJ9	315 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	TMEM95	Q3KNT9	176 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	GTDC1	Q4AE62	458 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	AGK	Q53H12	422 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	METTL21C	Q5VZV1	264 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	EPGN	Q6UW88	154 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	ETV3L	Q6ZN32	361 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	DCDC5	Q6ZRR9	648 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	ZNF627	Q7L945	461 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	RRM2B	Q7LG56	351 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	HDX	Q7Z353	690 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	PXK	Q7Z7A4	578 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	PATL1	Q86TB9	770 aa	Known RBP	4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	C20orf196	Q8IYI0	205 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	ALDH16A1	Q8IZ83	802 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	TMEM123	Q8N131	208 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602		Q8N2B8	174 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	LSMEM1	Q8N8F7	131 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	HIPK4	Q8NE63	616 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	C19orf18	Q8NEA5	215 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	OR51D1	Q8NGF3	324 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	OR6S1	Q8NH40	331 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	IL17D	Q8TAD2	202 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	LZIC	Q8WZA0	190 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	VPS33A	Q96AX1	596 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	SPDL1	Q96EA4	605 aa		4.34	□□□□□ -1.71
SEC13-219	ENST00000492602	TMEM19	Q96HH6	336 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms