RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, human

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTN4-215	ENST00000491592	FAM182A	Q5T1J6	154 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	OTUD1	Q5VV17	481 aa	Predicted RBP	4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	C22orf42	Q6IC83	251 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	OR2T5	Q6IEZ7	315 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	ZNF549	Q6P9A3	640 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	METTL7B	Q6UX53	244 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	SSX7	Q7RTT5	188 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	ZNF367	Q7RTV3	350 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	CPEB2	Q7Z5Q1	589 aa	Known RBP	4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	LHFPL3	Q86UP9	236 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	RALGPS2	Q86X27	583 aa	Predicted RBP	4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	SNX29P2	Q8IUI4	249 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	SFTPA2	Q8IWL1	248 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	RDH10	Q8IZV5	341 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	SPATA6L	Q8N4H0	392 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	NATD1	Q8N6N6	113 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	GDPD1	Q8N9F7	314 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	TEX45	Q8NA69	505 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	ZNF738	Q8NE65	137 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	SDR9C7	Q8NEX9	313 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	OR2T29	Q8NH02	315 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	OR1F12	Q8NHA8	337 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	CNIH3	Q8TBE1	160 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	SAP25	Q8TEE9	199 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	DNAJB3	Q8WWF6	145 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	C22orf15	Q8WYQ4	148 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	PIGT	Q969N2	578 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	NUS1	Q96E22	293 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	PYURF	Q96I23	114 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	GFM1	Q96RP9	751 aa	Known RBP	4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	ZNF382	Q96SR6	550 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	S1PR3	Q99500	378 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	GFI1	Q99684	422 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	MRPL45	Q9BRJ2	306 aa	Known RBP	4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	TIMM29	Q9BSF4	260 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	COPS4	Q9BT78	406 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	RSG1	Q9BU20	258 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	MCRIP2	Q9BUT9	160 aa	Known RBP	4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	RAB11FIP5	Q9BXF6	653 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	SYT4	Q9H2B2	425 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	ALG9	Q9H6U8	611 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	KIR3DX1	Q9H7L2	352 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592		Q9N2K0	584 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	C1orf123	Q9NWV4	160 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	C1orf109	Q9NX04	203 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	MIOX	Q9UGB7	285 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	ENOPH1	Q9UHY7	261 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	NXT1	Q9UKK6	140 aa	Known RBP	4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	NPIPA1	Q9UND3	350 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	STUB1	Q9UNE7	303 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	SAMD4A	Q9UPU9	718 aa	Known RBP	4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	RALGAPA2	Q2PPJ7	1873 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	SCN1A	P35498	2009 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	EVPL	Q92817	2033 aa		4.17	□□□□□ -1.74
RTN4-215	ENST00000491592	ZNF236	Q9UL36	1845 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	PLXNA1	Q9UIW2	1896 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592		A0A1W2PRF3	423 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592		A0A1W2PRM7	423 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	CASTOR2	A6NHX0	329 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	CLDN34	H7C241	214 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	OR7A17	O14581	309 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	SPRY3	O43610	288 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	FCN3	O75636	299 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	SNAPC5	O75971	98 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	TXNDC12	O95881	172 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	IFNA5	P01569	189 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	HAPLN1	P10915	354 aa	Predicted RBP	4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	NR2C1	P13056	603 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	TBXA2R	P21731	343 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	AADAC	P22760	399 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	MYL9	P24844	172 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	OR1E1	P30953	314 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	DAP	P51397	102 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	ERVS71-1	P61550	626 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	NAAA	Q02083	359 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	SRY	Q05066	204 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	QPRT	Q15274	297 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	TAB1	Q15750	504 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	ZBTB6	Q15916	424 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	POU2AF1	Q16633	256 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	CDKN3	Q16667	212 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	TMEM249	Q2WGJ8	235 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	SNAI3	Q3KNW1	292 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	TTLL9	Q3SXZ7	439 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	UTF1	Q5T230	341 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	IDNK	Q5T6J7	187 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	FAHD1	Q6P587	224 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	C19orf48	Q6RUI8	117 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	UQCC3	Q6UW78	93 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	ENPP6	Q6UWR7	440 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	CD300LG	Q6UXG3	332 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	LRRN1	Q6UXK5	716 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	RPS27L	Q71UM5	84 aa	Known RBP	4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	ABHD13	Q7L211	337 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	FCRLA	Q7L513	359 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	SSX6	Q7RTT6	188 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	BHLHA9	Q7RTU4	235 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	ANKRD33	Q7Z3H0	272 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	MOB3B	Q86TA1	216 aa		4.16	□□□□□ -1.74
RTN4-215	ENST00000491592	CALHM3	Q86XJ0	350 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms