RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 B9D1Q9UPM9 204 aa7.48□□□□□ -1.21
HDAC3-211ENST00000491581 A0A0G2JMP0 313 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 A0A0X1KG70 313 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 A0A1W2PRQ8 180 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 ARPC2O15144 300 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 SLC22A2O15244 555 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 CCDC22O60826 627 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 ENTPD5O75356 428 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 FCN3O75636 299 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 GYPBP06028 91 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 CD55P08174 381 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 ADH4P08319 380 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 CLUP10909 449 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 EGR1P18146 543 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 ATP6V1B2P21281 511 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 KITLGP21583 273 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 RRM2P31350 389 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 SLC6A9P48067 706 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 ARHGDIAP52565 204 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 HILS1P60008 231 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 PCBD1P61457 104 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 TEKQ02763 1124 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 PRB3Q04118 309 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-211ENST00000491581 SCRN3Q0VDG4 424 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 POU4F2Q12837 409 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 AQP6Q13520 282 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 DGCR6Q14129 220 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 MPPED2Q15777 294 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 SNAI3Q3KNW1 292 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 FAM205BPQ63HN1 556 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 CYP2R1Q6VVX0 501 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 HACD2Q6Y1H2 254 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 RRM2BQ7LG56 351 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 ARPINQ7Z6K5 226 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 MOGAT3Q86VF5 341 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 ZNF283Q8N7M2 679 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 SLC26A10Q8NG04 563 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 OR4M2Q8NGB6 313 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 OR9Q1Q8NGQ5 310 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 OR2AE1Q8NHA4 323 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 FANK1Q8TC84 345 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 HAVCR1Q96D42 359 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 TIMD4Q96H15 378 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 MAP6Q96JE9 813 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 MEGF10Q96KG7 1140 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 DHRS1Q96LJ7 313 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 ELOVL3Q9HB03 270 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 PNRC2Q9NPJ4 139 aaKnown RBP7.47□□□□□ -1.21
HDAC3-211ENST00000491581 UFSP2Q9NUQ7 469 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 TBCCD1Q9NVR7 557 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 TAS2R1Q9NYW7 299 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 STX18Q9P2W9 335 aaKnown RBP7.47□□□□□ -1.21
HDAC3-211ENST00000491581 NDRG4Q9ULP0 352 aaKnown RBP7.47□□□□□ -1.21
HDAC3-211ENST00000491581 AURKCQ9UQB9 309 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 PPP1R3CQ9UQK1 317 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 POLR1DQ9Y2S0 133 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 N6AMT1Q9Y5N5 214 aa7.47□□□□□ -1.21
HDAC3-211ENST00000491581 CEACAM18A8MTB9 384 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 F5H0A9 414 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-211ENST00000491581 F5H5K5 113 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 TMEM178BH3BS89 294 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 GADD45GO95257 159 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 MT-ND5P03915 603 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 TFF1P04155 84 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 SLC2A1P11166 492 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 RHCEP18577 417 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 IFNA8P32881 189 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 CD80P33681 288 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 GGT2P36268 569 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 GUCA1AP43080 201 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-211ENST00000491581 BTG1P62324 171 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 UBA52P62987 128 aaKnown RBP7.46□□□□□ -1.22
HDAC3-211ENST00000491581 HIST1H3AP68431 136 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 SRSF4Q08170 494 aaKnown RBP7.46□□□□□ -1.22
HDAC3-211ENST00000491581 ZNF154Q13106 437 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 MAB21L1Q13394 359 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 RFX4Q33E94 735 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 ZNF362Q5T0B9 420 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-211ENST00000491581 HIST2H3PS2Q5TEC6 136 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 SLC18B1Q6NT16 456 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 PGBD2Q6P3X8 592 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 HIST2H3AQ71DI3 136 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 SPATC1Q76KD6 591 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 SYT9Q86SS6 491 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 CYP4Z1Q86W10 505 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 LNX2Q8N448 690 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 BOLLQ8N9W6 283 aaKnown RBP7.46□□□□□ -1.22
HDAC3-211ENST00000491581 OR52E2Q8NGJ4 325 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 ST7LQ8TDW4 575 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 PYURFQ96I23 114 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 GPX7Q96SL4 187 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-211ENST00000491581 CDRT15Q96T59 188 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 BTBD10Q9BSF8 475 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 IFT27Q9BW83 186 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 CDADC1Q9BWV3 514 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 EGLN1Q9GZT9 426 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 RASSF4Q9H2L5 321 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 PATZ1Q9HBE1 687 aaKnown RBP7.46□□□□□ -1.22
HDAC3-211ENST00000491581 TMEM165Q9HC07 324 aa7.46□□□□□ -1.22
HDAC3-211ENST00000491581 SPAG4Q9NPE6 437 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms