RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 RNF148Q8N7C7 305 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 DEFB108BQ8NET1 73 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 OR52J3Q8NH60 311 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 GCDHQ92947 438 aaPredicted RBP11.49□□□□□ -0.57
COL6A3-211ENST00000491233 PTP4A1Q93096 173 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 C7orf34Q96L11 122 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 DHRS1Q96LJ7 313 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 TSSK2Q96PF2 358 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 GPA33Q99795 319 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 HDHD2Q9H0R4 259 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 SPAG4Q9NPE6 437 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 MED4Q9NPJ6 270 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 ESM1Q9NQ30 184 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 MMP26Q9NRE1 261 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 DCAF13Q9NV06 445 aaKnown RBP11.49□□□□□ -0.57
COL6A3-211ENST00000491233 ADA2Q9NZK5 511 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 IL19Q9UHD0 177 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 PPP1R3CQ9UQK1 317 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 LHFPL6Q9Y693 200 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 TMEM89A2RUT3 159 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 F5H0A9 414 aaPredicted RBP11.48□□□□□ -0.57
COL6A3-211ENST00000491233 DCTN6O00399 190 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 GMNNO75496 209 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 RAC2P15153 192 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 COMPP49747 757 aaPredicted RBP11.48□□□□□ -0.57
COL6A3-211ENST00000491233 RGS6P49758 472 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 SPIBQ01892 262 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 KRT72Q14CN4 511 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 ARMCX4Q5H9R4 360 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 OR2T2Q6IF00 324 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 PGM2L1Q6PCE3 622 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 SMARCD3Q6STE5 483 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 LRRC28Q86X40 367 aaPredicted RBP11.48□□□□□ -0.57
COL6A3-211ENST00000491233 ZDHHC22Q8N966 263 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 ATG16L2Q8NAA4 619 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 OR10AD1Q8NGE0 317 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 POP5Q969H6 163 aaKnown RBP11.48□□□□□ -0.57
COL6A3-211ENST00000491233 APOBEC3DQ96AK3 386 aaPredicted RBP11.48□□□□□ -0.57
COL6A3-211ENST00000491233 CMTM5Q96DZ9 223 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 ERMAPQ96PL5 475 aaPredicted RBP11.48□□□□□ -0.57
COL6A3-211ENST00000491233 COQ7Q99807 217 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 ELAC2Q9BQ52 826 aaKnown RBP11.48□□□□□ -0.57
COL6A3-211ENST00000491233 FUZQ9BT04 418 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 PLA2G12AQ9BZM1 189 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 MYLK2Q9H1R3 596 aa11.48□□□□□ -0.57
COL6A3-211ENST00000491233 IGLV1-36A0A0B4J1U3 117 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 A8MXK9 166 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 TRAPPC2LH3BP13 241 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 TMEM178BH3BS89 294 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 SEMG1P04279 462 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 ZNF12P17014 697 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 FPR2P25090 351 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 CRABP1P29762 137 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 PRDX6P30041 224 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 SLC6A6P31641 620 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 MDH2P40926 338 aaKnown RBP11.47□□□□□ -0.57
COL6A3-211ENST00000491233 HIST1H3AP68431 136 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 DBPQ10586 325 aaPredicted RBP11.47□□□□□ -0.57
COL6A3-211ENST00000491233 ZNF154Q13106 437 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 ESCO2Q56NI9 601 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 HIST2H3PS2Q5TEC6 136 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 LEG1Q6P5S2 330 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 CORO6Q6QEF8 472 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 FBXW12Q6X9E4 464 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 HIST2H3AQ71DI3 136 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 JAZF1Q86VZ6 243 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 C3orf56Q8N813 242 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 GJC3Q8NFK1 279 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 OR5L1Q8NGL2 311 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 ZNF420Q8TAQ5 688 aaPredicted RBP11.47□□□□□ -0.57
COL6A3-211ENST00000491233 MEGF10Q96KG7 1140 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 NMNAT3Q96T66 252 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 OR52D1Q9H346 318 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 GCM1Q9NP62 436 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 PPIAL4AQ9Y536 164 aa11.47□□□□□ -0.57
COL6A3-211ENST00000491233 CEACAM18A8MTB9 384 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 MLNRO43193 412 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 GADD45GO95257 159 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 RENP00797 406 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 SLC6A9P48067 706 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 PRSS12P56730 875 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 UBA52P62987 128 aaKnown RBP11.46□□□□□ -0.57
COL6A3-211ENST00000491233 COX10Q12887 443 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 CFAP77Q6ZQR2 320 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 LINC00346Q8IVM7 164 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 OR6V1Q8N148 313 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 MUC20Q8N307 709 aaPredicted RBP11.46□□□□□ -0.57
COL6A3-211ENST00000491233 BHLHE23Q8NDY6 225 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 SLC26A10Q8NG04 563 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 OR8G5Q8NG78 346 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 OR13G1Q8NGZ3 307 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 OR4K13Q8NH42 304 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 DVL3Q92997 716 aaPredicted RBP11.46□□□□□ -0.57
COL6A3-211ENST00000491233 MRI1Q9BV20 369 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 FAM107BQ9H098 131 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 FN3KQ9H479 309 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 WDR76Q9H967 626 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 DDX28Q9NUL7 540 aaKnown RBP11.46□□□□□ -0.57
COL6A3-211ENST00000491233 OR5V1Q9UGF6 321 aa11.46□□□□□ -0.57
COL6A3-211ENST00000491233 MAGEL2Q9UJ55 1249 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms