RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 GJC3Q8NFK1 279 aa15.43■□□□□ 0.06
COL9A3-214ENST00000490398 SNX33Q8WV41 574 aa15.43■□□□□ 0.06
COL9A3-214ENST00000490398 MAP6Q96JE9 813 aa15.43■□□□□ 0.06
COL9A3-214ENST00000490398 HCAR1Q9BXC0 346 aa15.43■□□□□ 0.06
COL9A3-214ENST00000490398 NMNAT2Q9BZQ4 307 aa15.43■□□□□ 0.06
COL9A3-214ENST00000490398 ELOVL3Q9HB03 270 aa15.43■□□□□ 0.06
COL9A3-214ENST00000490398 NTN4Q9HB63 628 aa15.43■□□□□ 0.06
COL9A3-214ENST00000490398 MSL2Q9HCI7 577 aa15.43■□□□□ 0.06
COL9A3-214ENST00000490398 CYB5R1Q9UHQ9 305 aa15.43■□□□□ 0.06
COL9A3-214ENST00000490398 A8MV72 311 aaPredicted RBP15.42■□□□□ 0.06
COL9A3-214ENST00000490398 GNGT2O14610 69 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 CRLF1O75462 422 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 HLA-DQA2P01906 255 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 GSTM3P21266 225 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 ZNF81P51508 661 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 ARHGDIAP52565 204 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 HLXQ14774 488 aaPredicted RBP15.42■□□□□ 0.06
COL9A3-214ENST00000490398 CYB5R2Q6BCY4 276 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 Q6ZR03 302 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 NAA40Q86UY6 237 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 ZNF511Q8NB15 262 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 PROKR2Q8NFJ6 384 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 OR2T33Q8NG76 320 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 OR10S1Q8NGN2 331 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 POP5Q969H6 163 aaKnown RBP15.42■□□□□ 0.06
COL9A3-214ENST00000490398 CMBLQ96DG6 245 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 COQ7Q99807 217 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 NARFLQ9H6Q4 476 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 MED20Q9H944 212 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 WDR76Q9H967 626 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 CHODLQ9H9P2 273 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 TREM2Q9NZC2 230 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 PTTG3PQ9NZH4 202 aa15.42■□□□□ 0.06
COL9A3-214ENST00000490398 FAM183AA6NL82 134 aa15.41■□□□□ 0.06
COL9A3-214ENST00000490398 TIPRLO75663 272 aa15.41■□□□□ 0.06
COL9A3-214ENST00000490398 ACHEP22303 614 aa15.41■□□□□ 0.06
COL9A3-214ENST00000490398 PRSS12P56730 875 aa15.41■□□□□ 0.06
COL9A3-214ENST00000490398 CCNIQ14094 377 aa15.41■□□□□ 0.06
COL9A3-214ENST00000490398 KRTAP21-3Q3LHN1 58 aa15.41■□□□□ 0.06
COL9A3-214ENST00000490398 ACSM5Q6NUN0 579 aa15.41■□□□□ 0.06
COL9A3-214ENST00000490398 ZNF540Q8NDQ6 660 aa15.41■□□□□ 0.06
COL9A3-214ENST00000490398 HDHD2Q9H0R4 259 aa15.41■□□□□ 0.06
COL9A3-214ENST00000490398 NKIRAS2Q9NYR9 191 aa15.41■□□□□ 0.06
COL9A3-214ENST00000490398 GPR160Q9UJ42 338 aa15.41■□□□□ 0.06
COL9A3-214ENST00000490398 PURGQ9UJV8 347 aaKnown RBP15.41■□□□□ 0.06
COL9A3-214ENST00000490398 C5orf63A6NC05 138 aa15.4■□□□□ 0.06
COL9A3-214ENST00000490398 KIAA1324LA8MWY0 1029 aaPredicted RBP15.4■□□□□ 0.06
COL9A3-214ENST00000490398 SPI1P17947 270 aa15.4■□□□□ 0.06
COL9A3-214ENST00000490398 POU1F1P28069 291 aa15.4■□□□□ 0.06
COL9A3-214ENST00000490398 GPR6P46095 362 aaPredicted RBP15.4■□□□□ 0.06
COL9A3-214ENST00000490398 GZMKP49863 264 aa15.4■□□□□ 0.06
COL9A3-214ENST00000490398 PCGF3Q3KNV8 242 aa15.4■□□□□ 0.06
COL9A3-214ENST00000490398 AVPI1Q5T686 147 aa15.4■□□□□ 0.06
COL9A3-214ENST00000490398 LINC01590Q5TEZ4 76 aa15.4■□□□□ 0.06
COL9A3-214ENST00000490398 ARL9Q6T311 187 aa15.4■□□□□ 0.06
COL9A3-214ENST00000490398 USP51Q70EK9 711 aa15.4■□□□□ 0.06
COL9A3-214ENST00000490398 OR2T4Q8NH00 348 aa15.4■□□□□ 0.06
COL9A3-214ENST00000490398 UTP4Q969X6 686 aaKnown RBP15.4■□□□□ 0.06
COL9A3-214ENST00000490398 DCAF16Q9NXF7 216 aa15.4■□□□□ 0.06
COL9A3-214ENST00000490398 DNAJB9Q9UBS3 223 aa15.4■□□□□ 0.06
COL9A3-214ENST00000490398 FBN1P35555 2871 aaKnown RBP15.39■□□□□ 0.05
COL9A3-214ENST00000490398 LOC100289279A0A1B0GTE1 492 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 ARRDC5A6NEK1 342 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 H3BN98 237 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 H3BSA7 217 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 PPIHO43447 177 aaKnown RBP15.39■□□□□ 0.05
COL9A3-214ENST00000490398 TIMM8AO60220 97 aaPredicted RBP15.39■□□□□ 0.05
COL9A3-214ENST00000490398 E2F6O75461 281 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 ACSM4P0C7M7 580 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 KITLGP21583 273 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 CRYBB2P43320 205 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 SLC25A1P53007 311 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 MRPS11P82912 194 aaKnown RBP15.39■□□□□ 0.05
COL9A3-214ENST00000490398 GK3PQ14409 553 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 GINS1Q14691 196 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 MOGQ16653 247 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 UNQ6126/PRO20091Q6UXV3 157 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 HIPK1Q86Z02 1210 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 OR5AS1Q8N127 324 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 CLDND2Q8NHS1 167 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 HAVCR1Q96D42 359 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 PITX2Q99697 317 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 CDADC1Q9BWV3 514 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 CMC2Q9NRP2 79 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 ATPIF1Q9UII2 106 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 BAIAP2Q9UQB8 552 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 COMMD3-BMI1R4GMX3 469 aa15.39■□□□□ 0.05
COL9A3-214ENST00000490398 F5H5K5 113 aa15.38■□□□□ 0.05
COL9A3-214ENST00000490398 TPD52L2O43399 206 aaKnown RBP15.38■□□□□ 0.05
COL9A3-214ENST00000490398 ZNF823P16415 610 aa15.38■□□□□ 0.05
COL9A3-214ENST00000490398 IGFBP5P24593 272 aa15.38■□□□□ 0.05
COL9A3-214ENST00000490398 GRK5P34947 590 aa15.38■□□□□ 0.05
COL9A3-214ENST00000490398 CHN2P52757 468 aa15.38■□□□□ 0.05
COL9A3-214ENST00000490398 CDK5R2Q13319 367 aa15.38■□□□□ 0.05
COL9A3-214ENST00000490398 TMEM236Q5W0B7 351 aa15.38■□□□□ 0.05
COL9A3-214ENST00000490398 OR2T2Q6IF00 324 aa15.38■□□□□ 0.05
COL9A3-214ENST00000490398 COLCA1Q6ZS62 124 aa15.38■□□□□ 0.05
COL9A3-214ENST00000490398 IL17RELQ6ZVW7 336 aa15.38■□□□□ 0.05
COL9A3-214ENST00000490398 C1orf174Q8IYL3 243 aa15.38■□□□□ 0.05
COL9A3-214ENST00000490398 OR2AJ1Q8NGZ0 328 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms