RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 FAM216AQ8WUB2 273 aa16.34■□□□□ 0.21
TNFRSF1B-202ENST00000489921 DVL3Q92997 716 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF1B-202ENST00000489921 SLC6A7Q99884 636 aa16.34■□□□□ 0.21
TNFRSF1B-202ENST00000489921 NDEL1Q9GZM8 345 aa16.34■□□□□ 0.21
TNFRSF1B-202ENST00000489921 C7orf69Q9H7B7 122 aa16.34■□□□□ 0.21
TNFRSF1B-202ENST00000489921 B9D1Q9UPM9 204 aa16.34■□□□□ 0.21
TNFRSF1B-202ENST00000489921 F5H0A9 414 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 PPP1R3DO95685 299 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 SLC6A9P48067 706 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 RPS6KA3P51812 740 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 RFX4Q33E94 735 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 KRTAP27-1Q3LI81 207 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 CORO6Q6QEF8 472 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 OR5AS1Q8N127 324 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 DEFB108BQ8NET1 73 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 NANPQ8TBE9 248 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 PYURFQ96I23 114 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 COG8Q96MW5 612 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 OR2V2Q96R30 315 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 PATZ1Q9HBE1 687 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 GCM1Q9NP62 436 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 PTTG3PQ9NZH4 202 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ADA2Q9NZK5 511 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 CD300AQ9UGN4 299 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 AURKCQ9UQB9 309 aa16.33■□□□□ 0.2
TNFRSF1B-202ENST00000489921 TMEM89A2RUT3 159 aa16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 H0YL77 283 aa16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 J3QW42 95 aa16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 TNFRSF1AP19438 455 aa16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 TNFSF4P23510 183 aa16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 MSX2P35548 267 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 BTG1P62324 171 aa16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 TMEM155Q4W5P6 130 aa16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 OR2T2Q6IF00 324 aa16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 COLCA1Q6ZS62 124 aa16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ZDHHC22Q8N966 263 aa16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ERMAPQ96PL5 475 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 NMNAT3Q96T66 252 aa16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 OR52D1Q9H346 318 aa16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 SRA1Q9HD15 236 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 PPP1R3CQ9UQK1 317 aa16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 V9GYQ6 96 aa16.32■□□□□ 0.2
TNFRSF1B-202ENST00000489921 A0A1B0GWJ7 208 aa16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 TMEM178BH3BS89 294 aa16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ARPC3O15145 178 aa16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 SNX3O60493 162 aa16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 FOXH1O75593 365 aa16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 HSD17B1P14061 328 aa16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 HIST1H1CP16403 213 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 CRABP1P29762 137 aa16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 RGS6P49758 472 aa16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 COX10Q12887 443 aa16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 C12orf54Q6X4T0 127 aa16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ZBTB46Q86UZ6 589 aa16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 GJC3Q8NFK1 279 aa16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 SLC26A10Q8NG04 563 aa16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 OR8G5Q8NG78 346 aa16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ST7LQ8TDW4 575 aa16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 COQ7Q99807 217 aa16.31■□□□□ 0.2
TNFRSF1B-202ENST00000489921 OR6C68A6NDL8 312 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 A8MXK9 166 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 MLNRO43193 412 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 GADD45GO95257 159 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 FPR3P25089 353 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 GSSP48637 474 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 MMP16P51512 607 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 KRT72Q14CN4 511 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 KLF17Q5JT82 389 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 LEG1Q6P5S2 330 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 CFAP77Q6ZQR2 320 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 NAA40Q86UY6 237 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 SPICQ8N5J4 248 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 OR10AD1Q8NGE0 317 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 OR4K13Q8NH42 304 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 FANK1Q8TC84 345 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 C22orf15Q8WYQ4 148 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 APOBEC3DQ96AK3 386 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 MEGF10Q96KG7 1140 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 SLC30A2Q9BRI3 323 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 SUCNR1Q9BXA5 334 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 C1QTNF5Q9BXJ0 243 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 HDHD2Q9H0R4 259 aa16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 PNRC2Q9NPJ4 139 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1B-202ENST00000489921 TRIM77I1YAP6 450 aa16.29■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ZNF12P17014 697 aa16.29■□□□□ 0.2
TNFRSF1B-202ENST00000489921 CENPAP49450 140 aa16.29■□□□□ 0.2
TNFRSF1B-202ENST00000489921 SPIBQ01892 262 aa16.29■□□□□ 0.2
TNFRSF1B-202ENST00000489921 PAX2Q02962 417 aa16.29■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ZNF154Q13106 437 aa16.29■□□□□ 0.2
TNFRSF1B-202ENST00000489921 SLC18B1Q6NT16 456 aa16.29■□□□□ 0.2
TNFRSF1B-202ENST00000489921 PGM2L1Q6PCE3 622 aa16.29■□□□□ 0.2
TNFRSF1B-202ENST00000489921 KLHL36Q8N4N3 616 aa16.29■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ATG16L2Q8NAA4 619 aa16.29■□□□□ 0.2
TNFRSF1B-202ENST00000489921 ZNF420Q8TAQ5 688 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1B-202ENST00000489921 DDOQ99489 341 aa16.29■□□□□ 0.2
TNFRSF1B-202ENST00000489921 WDR76Q9H967 626 aa16.29■□□□□ 0.2
TNFRSF1B-202ENST00000489921 TMEM165Q9HC07 324 aa16.29■□□□□ 0.2
TNFRSF1B-202ENST00000489921 KRCC1Q9NPI7 259 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1B-202ENST00000489921 MAGEL2Q9UJ55 1249 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms