RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 HOXB4P17483 251 aaPredicted RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 EDNRAP25101 427 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 HOXD9P28356 352 aaPredicted RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 TACR3P29371 465 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 APLNRP35414 380 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 BUD31P41223 144 aaPredicted RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 OR1G1P47890 313 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 NPY4RP50391 375 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 MANFP55145 182 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 BACE1P56817 501 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 IL13RA1P78552 427 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 SGCGQ13326 291 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 ARHGAP19Q14CB8 494 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 NR0B2Q15466 257 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 TP53I3Q53FA7 332 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 SOHLH1Q5JUK2 328 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 PIP5KL1Q5T9C9 394 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 STPG1Q5TH74 334 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 PRAMEF8Q5VWM4 474 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 PRAMEF7Q5VXH5 474 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 TMEM268Q5VZI3 342 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 FDX2Q6P4F2 183 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 BTNL3Q6UXE8 466 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 FAM151BQ6UXP7 276 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 STAC2Q6ZMT1 411 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 TTLL10Q6ZVT0 673 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 MBOAT2Q6ZWT7 520 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 SMIM15Q7Z3B0 74 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 TMEM173Q86WV6 379 aaPredicted RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 C9orf40Q8IXQ3 194 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 ZDHHC22Q8N966 263 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 SEMA6DQ8NFY4 1073 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 OR9K2Q8NGE7 335 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 OR52L1Q8NGH7 329 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 OR5AK2Q8NH90 309 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 CXorf40AQ8TE69 158 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 Q8WTZ3 238 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 FRZBQ92765 325 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 DIO2Q92813 273 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 DVL3Q92997 716 aaPredicted RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 EID2BQ96D98 161 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 ARSGQ96EG1 525 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC41A3Q96GZ6 507 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 FAM210BQ96KR6 192 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 GNRHR2Q96P88 292 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 ARHGDIGQ99819 225 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF2Q9BSG1 426 aaPredicted RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 GPR87Q9BY21 358 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 KATNBL1Q9H079 304 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 PCED1AQ9H1Q7 454 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 MSL2Q9HCI7 577 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 CHST11Q9NPF2 352 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 IL26Q9NPH9 171 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 OR2S2Q9NQN1 319 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 GPR173Q9NS66 373 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 FAM212BQ9NTI7 297 aaPredicted RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 TAAR2Q9P1P5 351 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 CRLS1Q9UJA2 301 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 TCFL5Q9UL49 500 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 MRPS33Q9Y291 106 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 PPIL1Q9Y3C6 166 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 MMP24Q9Y5R2 645 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 PATJQ8NI35 1801 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF106Q9H2Y7 1883 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 LOC100509620A0A075B734 347 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 C13orf42A0A1B0GVH6 325 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 MEGF11A6BM72 1044 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 NKX6-3A6NJ46 265 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 RIIAD1A6NNX1 92 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 RAB27BO00194 218 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 BHLHE40O14503 412 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 RRP8O43159 456 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 CYB5BO43169 146 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 KCNAB3O43448 404 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF354AO60765 605 aaPredicted RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 CTAG2O75638 210 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 JTBO76095 146 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 RCBTB2O95199 551 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 EOMESO95936 686 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 AMBPP02760 352 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 CSTBP04080 98 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 ASGR1P07306 291 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 DCNP07585 359 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 CST2P09228 141 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 ZGLP1P0C6A0 271 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 ELFN1P0C7U0 828 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF286BP0CG31 522 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 TMIGD3P0DMS9 266 aaPredicted RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 CD37P11049 281 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 FOLR1P15328 257 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 CSRP1P21291 193 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC2A5P22732 501 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 TEAD1P28347 426 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 TAGLN2P37802 199 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 GPR4P46093 362 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 GLIPR1P48060 266 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 LSSP48449 732 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 PGFP49763 221 aa4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 AFF3P51826 1226 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-206ENST00000489853 PDX1P52945 283 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms