RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 GALK2Q01415 458 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 PCGF3Q3KNV8 242 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 AGKQ53H12 422 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 TMEM255AQ5JRV8 349 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 ENTPD8Q5MY95 495 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 BEND6Q5SZJ8 279 aaPredicted RBP5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 C10orf128Q5T292 105 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 FAHD2BQ6P2I3 314 aaPredicted RBP5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 C1QL2Q7Z5L3 287 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 RANBP3LQ86VV4 465 aaPredicted RBP5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 IZUMO1Q8IYV9 350 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 C10orf53Q8N6V4 93 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 C11orf65Q8NCR3 313 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 OR4K5Q8NGD3 323 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 SYNPRQ8TBG9 265 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 ADAMTS16Q8TE57 1224 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 ZNF418Q8TF45 676 aaPredicted RBP5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 LIPHQ8WWY8 451 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 C11orf40Q8WZ69 217 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 MCHR2Q969V1 340 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 ZNF566Q969W8 418 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 FAHD2AQ96GK7 314 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 MPP4Q96JB8 637 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 BCL2L14Q9BZR8 327 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 C1orf198Q9H425 327 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 NARFLQ9H6Q4 476 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 ZNF665Q9H7R5 613 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 KAT8Q9H7Z6 458 aaKnown RBP5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 SIAEQ9HAT2 523 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 LPAR2Q9HBW0 351 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 NANSQ9NR45 359 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 OPN4Q9UHM6 478 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 KLHL21Q9UJP4 597 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 ZNF229Q9UJW7 825 aa5.38□□□□□ -1.55
PRPF40A-210ENST00000489741 LOC100509620A0A075B734 347 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 PPIAL4EA0A075B759 164 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 LOC105371242A0A075B767 164 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 IGKV1D-43A0A0B4J1Z2 117 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 PPIAL4CA0A0B4J2A2 164 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 IGHV1-69-2A0A0G2JMI3 117 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 A0A1W2PPW3 197 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 TRAPPC13A5PLN9 417 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 CPSF4LA6NMK7 179 aaKnown RBP5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 PPIAL4DF5H284 164 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 J3QLI3 93 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 POLR3GO15318 223 aaPredicted RBP5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 RNF13O43567 381 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 TRMUO75648 421 aaKnown RBP5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 SERPINI2O75830 405 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 OR6A2O95222 327 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 MPZL1O95297 269 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 FARS2O95363 451 aaKnown RBP5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 BCL10O95999 233 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 PNPP00491 289 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 PTHP01270 115 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 IGHV2-5P01817 119 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 IGHG1P01857 330 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 PPIAL4FP0DN26 164 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 WNT5AP41221 380 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 ZNF81P51508 661 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 UGT2B15P54855 530 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 SELENOVP59797 346 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 NCALDP61601 193 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 MRPS34P82930 218 aaKnown RBP5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 HOXA4Q00056 320 aaPredicted RBP5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 SCGB2A2Q13296 93 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 SELPLGQ14242 412 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 MELKQ14680 651 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 MOGQ16653 247 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 ALKBH6Q3KRA9 238 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 SLC36A2Q495M3 483 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 ARMC4Q5T2S8 1044 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 TMEM53Q6P2H8 277 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 TMEM154Q6P9G4 183 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 TTC33Q6PID6 262 aaPredicted RBP5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 CCDC80Q76M96 950 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 SLC16A14Q7RTX9 510 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 SPARTQ8N0X7 666 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 TEX29Q8N6K0 151 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 ZDHHC22Q8N966 263 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 OR1J2Q8NGS2 313 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 SGMS2Q8NHU3 365 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 GTF3AQ92664 365 aaKnown RBP5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 NABP1Q96AH0 204 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 TAMM41Q96BW9 452 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 DAZAP1Q96EP5 407 aaKnown RBP5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 POM121L2Q96KW2 1035 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 ZNF347Q96SE7 839 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 CGREF1Q99674 301 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 RBM4Q9BWF3 364 aaKnown RBP5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 ESM1Q9NQ30 184 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 LEF1Q9UJU2 399 aaPredicted RBP5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 SLC13A4Q9UKG4 626 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 SLC7A7Q9UM01 511 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 ANGPT4Q9Y264 503 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 WIPI2Q9Y4P8 454 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 UGT2A1Q9Y4X1 527 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 CACNG2Q9Y698 323 aa5.37□□□□□ -1.55
PRPF40A-210ENST00000489741 TGP01266 2768 aa5.36□□□□□ -1.55
PRPF40A-210ENST00000489741 IQCMA0A1B0GVH7 501 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms