RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 SLC18B1Q6NT16 456 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 SHQ1Q6PI26 577 aaKnown RBP12.21□□□□□ -0.45
BRCA1-218ENST00000489037 HIST2H3AQ71DI3 136 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 TMEM179BQ7Z7N9 219 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 OR9Q1Q8NGQ5 310 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 DNAJC9Q8WXX5 260 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 SLC7A6Q92536 515 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 PTP4A1Q93096 173 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 APOBEC3DQ96AK3 386 aaPredicted RBP12.21□□□□□ -0.45
BRCA1-218ENST00000489037 DDOQ99489 341 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 BPESC1Q9GZL8 116 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 EGLN1Q9GZT9 426 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 CHODLQ9H9P2 273 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 CMC2Q9NRP2 79 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 CYB5R1Q9UHQ9 305 aa12.21□□□□□ -0.45
BRCA1-218ENST00000489037 SPRY3O43610 288 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 FCGR1AP12314 374 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 PRKACGP22612 351 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 MAGEB1P43366 347 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 GPR6P46095 362 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-218ENST00000489037 CHN2P52757 468 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 CCL8P80075 99 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 GINS1Q14691 196 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 TSTQ16762 297 aaKnown RBP12.2□□□□□ -0.46
BRCA1-218ENST00000489037 ZNF362Q5T0B9 420 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-218ENST00000489037 OR51L1Q8NGJ5 315 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 OR6K6Q8NGW6 343 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 OR5K1Q8NHB7 308 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 SPTSSAQ969W0 71 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 SLCO4A1Q96BD0 722 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 PLEKHA8Q96JA3 519 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 DIRC2Q96SL1 478 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 ATF6BQ99941 703 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 RBM4Q9BWF3 364 aaKnown RBP12.2□□□□□ -0.46
BRCA1-218ENST00000489037 ZDHHC8Q9ULC8 765 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 STARD10Q9Y365 291 aa12.2□□□□□ -0.46
BRCA1-218ENST00000489037 SONP18583 2426 aaKnown RBP12.19□□□□□ -0.46
BRCA1-218ENST00000489037 ZFHX3Q15911 3703 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 ZANQ9Y493 2812 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 A0A096LNT2 108 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 TVP23AA6NH52 213 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 F5H5K5 113 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 LYNX1G3V0Z9 82 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 DBHP09172 617 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 LYNX1P0DP58 116 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 ZNF23P17027 643 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 SPI1P17947 270 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 TNFSF4P23510 183 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 COL8A2P25067 703 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 FASP25445 335 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 GGT2P36268 569 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 ENTPD1P49961 510 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 TPTEP56180 551 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 TMEM33P57088 247 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 TAF13Q15543 124 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 HIPK1Q86Z02 1210 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 HS3ST5Q8IZT8 346 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 IQCF1Q8N6M8 205 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 CMBLQ96DG6 245 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 SAP30LQ9HAJ7 183 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 MRPL22Q9NWU5 206 aaKnown RBP12.19□□□□□ -0.46
BRCA1-218ENST00000489037 PURGQ9UJV8 347 aaKnown RBP12.19□□□□□ -0.46
BRCA1-218ENST00000489037 AP4S1Q9Y587 144 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 NSD1Q96L73 2696 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-218ENST00000489037 MALRD1Q5VYJ5 2156 aa12.19□□□□□ -0.46
BRCA1-218ENST00000489037 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■■■■□ 24
BRCA1-218ENST00000489037 IGHV4-61A0A0C4DH41 118 aa12.18□□□□□ -0.46
BRCA1-218ENST00000489037 A8MV72 311 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-218ENST00000489037 INAFM1C9JVW0 142 aa12.18□□□□□ -0.46
BRCA1-218ENST00000489037 PRR23D1E9PI22 279 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-218ENST00000489037 PPIHO43447 177 aaKnown RBP12.18□□□□□ -0.46
BRCA1-218ENST00000489037 GYPBP06028 91 aa12.18□□□□□ -0.46
BRCA1-218ENST00000489037 SPARCP09486 303 aa12.18□□□□□ -0.46
BRCA1-218ENST00000489037 PRR23D2P0DMB1 279 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-218ENST00000489037 RAC2P15153 192 aa12.18□□□□□ -0.46
BRCA1-218ENST00000489037 MMP15P51511 669 aa12.18□□□□□ -0.46
BRCA1-218ENST00000489037 DBPQ10586 325 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-218ENST00000489037 MALLQ13021 153 aa12.18□□□□□ -0.46
BRCA1-218ENST00000489037 PSG7Q13046 419 aa12.18□□□□□ -0.46
BRCA1-218ENST00000489037 RIN1Q13671 783 aa12.18□□□□□ -0.46
BRCA1-218ENST00000489037 CFAP77Q6ZQR2 320 aa12.18□□□□□ -0.46
BRCA1-218ENST00000489037 HAVCR1Q96D42 359 aa12.18□□□□□ -0.46
BRCA1-218ENST00000489037 ELMOD3Q96FG2 381 aa12.18□□□□□ -0.46
BRCA1-218ENST00000489037 HCAR1Q9BXC0 346 aa12.18□□□□□ -0.46
BRCA1-218ENST00000489037 NMNAT2Q9BZQ4 307 aa12.18□□□□□ -0.46
BRCA1-218ENST00000489037 PAPOLBQ9NRJ5 636 aaKnown RBP12.18□□□□□ -0.46
BRCA1-218ENST00000489037 PTTG3PQ9NZH4 202 aa12.18□□□□□ -0.46
BRCA1-218ENST00000489037 COMMD3-BMI1R4GMX3 469 aa12.18□□□□□ -0.46
BRCA1-218ENST00000489037 FN1P02751 2386 aaKnown RBP12.18□□□□□ -0.46
BRCA1-218ENST00000489037 DYSFO75923 2080 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 NIPBLQ6KC79 2804 aaeCLIP12.17□□□□□ -0.46
BRCA1-218ENST00000489037 IGHV1-69-2A0A0G2JMI3 117 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 G3V2T6 193 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 ZNF593O00488 134 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-218ENST00000489037 EBAG9O00559 213 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 SURF4O15260 269 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 CDC14BO60729 498 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 NCR1O76036 304 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 IGHV1-46P01743 117 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 LCATP04180 440 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms