RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 SEZ6L2Q6UXD5 910 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 CFAP77Q6ZQR2 320 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 HIST2H3AQ71DI3 136 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 SLC35F2Q8IXU6 374 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 CPEB3Q8NE35 698 aaKnown RBP8.93□□□□□ -0.98
SKA1-204ENST00000488454 OR10H4Q8NGA5 316 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 OR4F15Q8NGB8 312 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 OR2T27Q8NH04 317 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 OTOSQ8NHW6 89 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 IPCEF1Q8WWN9 437 aaPredicted RBP8.93□□□□□ -0.98
SKA1-204ENST00000488454 SPTSSAQ969W0 71 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 SLAMF6Q96DU3 332 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 MRPL48Q96GC5 212 aaKnown RBP8.93□□□□□ -0.98
SKA1-204ENST00000488454 CNBD2Q96M20 576 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 ZNF75AQ96N20 296 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 COQ7Q99807 217 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 ATF6BQ99941 703 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 COPS4Q9BT78 406 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 ABHD6Q9BV23 337 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 ANKRD60Q9BZ19 345 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 ADGRL4Q9HBW9 690 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 AMBNQ9NP70 447 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 SCN3BQ9NY72 215 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 ATP23Q9Y6H3 246 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 HCFC1P51610 2035 aa8.93□□□□□ -0.98
SKA1-204ENST00000488454 GCN1Q92616 2671 aaKnown RBP8.92□□□□□ -0.98
SKA1-204ENST00000488454 CACNA1CQ13936 2221 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 DAPL1A0PJW8 107 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 ZNF878C9JN71 531 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 F5H5K5 113 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 FAM20BO75063 409 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 WBP4O75554 376 aaKnown RBP8.92□□□□□ -0.98
SKA1-204ENST00000488454 APOL3O95236 402 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 H2BFMP0C1H6 154 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 CCL2P13500 99 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 ALOX5APP20292 161 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 HSD11B1P28845 292 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 SSTR2P30874 369 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 RAD52P43351 418 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 HCCSP53701 268 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 TPTEP56180 551 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 GRB2P62993 217 aaKnown RBP8.92□□□□□ -0.98
SKA1-204ENST00000488454 ACTC1P68032 377 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 ACTA1P68133 377 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 TLE4Q04727 773 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 ZNF91Q05481 1191 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 RAB40BQ12829 278 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 MED21Q13503 144 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 SMN1Q16637 294 aaKnown RBP8.92□□□□□ -0.98
SKA1-204ENST00000488454 SPATC1Q76KD6 591 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 RHOUQ7L0Q8 258 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 KRT77Q7Z794 578 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 TMEM200AQ86VY9 491 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 CDC20BQ86Y33 519 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 ZNF584Q8IVC4 421 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 BPIFB6Q8NFQ5 453 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 SMAP2Q8WU79 429 aaPredicted RBP8.92□□□□□ -0.98
SKA1-204ENST00000488454 APH1BQ8WW43 257 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 C14orf79Q96F83 325 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 MAP6Q96JE9 813 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 POM121L2Q96KW2 1035 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 DCLRE1CQ96SD1 692 aaKnown RBP8.92□□□□□ -0.98
SKA1-204ENST00000488454 TBX5Q99593 518 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 MROQ9BYG7 248 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 ELOVL3Q9HB03 270 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 CHCHD3Q9NX63 227 aaKnown RBP8.92□□□□□ -0.98
SKA1-204ENST00000488454 ATPIF1Q9UII2 106 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 GRIP1Q9Y3R0 1128 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 LRRK2Q5S007 2527 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 NAV2Q8IVL1 2488 aa8.92□□□□□ -0.98
SKA1-204ENST00000488454 TENM4Q6N022 2769 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 IGHV2OR16-5A0A0B4J2B6 119 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 EFCAB10A6NFE3 127 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 SYNGR3O43761 229 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 CTAG2O75638 210 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 ABHD16AO95870 558 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 APOC1P02654 83 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 ZNF35P13682 527 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 CXCR4P61073 352 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 EGR3Q06889 387 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 C6orf141Q5SZD1 244 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 ADAM5Q6NVV9 412 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 DEGS2Q6QHC5 323 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 ZNF704Q6ZNC4 412 aaPredicted RBP8.91□□□□□ -0.98
SKA1-204ENST00000488454 C1orf174Q8IYL3 243 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 ACBD7Q8N6N7 88 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 ST7LQ8TDW4 575 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 FBLIM1Q8WUP2 373 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 SNX33Q8WV41 574 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 RNF133Q8WVZ7 376 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 LGALS12Q96DT0 336 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 C4orf45Q96LM5 186 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 KCNJ15Q99712 375 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 CLEC4MQ9H2X3 399 aaPredicted RBP8.91□□□□□ -0.98
SKA1-204ENST00000488454 NIPAL2Q9H841 368 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 SP140LQ9H930 580 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 DDX28Q9NUL7 540 aaKnown RBP8.91□□□□□ -0.98
SKA1-204ENST00000488454 MRPS18AQ9NVS2 196 aaKnown RBP8.91□□□□□ -0.98
SKA1-204ENST00000488454 IKZF2Q9UKS7 526 aa8.91□□□□□ -0.98
SKA1-204ENST00000488454 EXOGQ9Y2C4 368 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms