RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 KLHL22Q53GT1 634 aa11.51□□□□□ -0.57
COL4A6-207ENST00000487645 KCTD18Q6PI47 426 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-207ENST00000487645 DEGS2Q6QHC5 323 aa11.51□□□□□ -0.57
COL4A6-207ENST00000487645 TMEM200AQ86VY9 491 aa11.51□□□□□ -0.57
COL4A6-207ENST00000487645 SLC35F2Q8IXU6 374 aa11.51□□□□□ -0.57
COL4A6-207ENST00000487645 OR51G2Q8NGK0 314 aa11.51□□□□□ -0.57
COL4A6-207ENST00000487645 CNIH3Q8TBE1 160 aa11.51□□□□□ -0.57
COL4A6-207ENST00000487645 SPTSSAQ969W0 71 aa11.51□□□□□ -0.57
COL4A6-207ENST00000487645 RNFT2Q96EX2 444 aa11.51□□□□□ -0.57
COL4A6-207ENST00000487645 C4orf45Q96LM5 186 aa11.51□□□□□ -0.57
COL4A6-207ENST00000487645 ZNF184Q99676 751 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-207ENST00000487645 PLEKHF2Q9H8W4 249 aa11.51□□□□□ -0.57
COL4A6-207ENST00000487645 ELOVL3Q9HB03 270 aa11.51□□□□□ -0.57
COL4A6-207ENST00000487645 CENPMQ9NSP4 180 aa11.51□□□□□ -0.57
COL4A6-207ENST00000487645 TBCCD1Q9NVR7 557 aa11.51□□□□□ -0.57
COL4A6-207ENST00000487645 POU2F3Q9UKI9 436 aa11.51□□□□□ -0.57
COL4A6-207ENST00000487645 ATP23Q9Y6H3 246 aa11.51□□□□□ -0.57
COL4A6-207ENST00000487645 A0A1W2PPR1 153 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 E7EQL1 145 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 ZNF670-ZNF695F2Z2N8 137 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 J3QRE1 110 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 HS3ST1O14792 307 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 ZNF254O75437 659 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 APOC1P02654 83 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 CCL2P13500 99 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 TUBG1P23258 451 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 OTX1P32242 354 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-207ENST00000487645 GLRXP35754 106 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 RGS6P49758 472 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 TPTEP56180 551 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 NKX6-1P78426 367 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-207ENST00000487645 ROM1Q03395 351 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 ZNF91Q05481 1191 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 RAB40BQ12829 278 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 TAF13Q15543 124 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 SMN1Q16637 294 aaKnown RBP11.5□□□□□ -0.57
COL4A6-207ENST00000487645 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-207ENST00000487645 PAQR4Q8N4S7 273 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-207ENST00000487645 KBTBD8Q8NFY9 601 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 SMAP2Q8WU79 429 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-207ENST00000487645 AKAP1Q92667 903 aaKnown RBP eCLIP11.5□□□□□ -0.57
COL4A6-207ENST00000487645 KCNJ15Q99712 375 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 BCL2L14Q9BZR8 327 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 Q9H521 79 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 NIPAL2Q9H841 368 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 TUBG2Q9NRH3 451 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 PLCXD1Q9NUJ7 323 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 CISD1Q9NZ45 108 aaKnown RBP11.5□□□□□ -0.57
COL4A6-207ENST00000487645 FBN2P35556 2912 aa11.5□□□□□ -0.57
COL4A6-207ENST00000487645 ITPR2Q14571 2701 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 IRGMA1A4Y4 181 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 F5H5K5 113 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 J3QW42 95 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 FADS2O95864 444 aaKnown RBP11.49□□□□□ -0.57
COL4A6-207ENST00000487645 DBHP09172 617 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 H2BFMP0C1H6 154 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 ACSM4P0C7M7 580 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 PRF1P14222 555 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 APOBEC3AP31941 199 aaPredicted RBP11.49□□□□□ -0.57
COL4A6-207ENST00000487645 DCTDP32321 178 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 OPRL1P41146 370 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 CXCR4P61073 352 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 RPS23P62266 143 aaKnown RBP11.49□□□□□ -0.57
COL4A6-207ENST00000487645 ACTC1P68032 377 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 ACTA1P68133 377 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 EGR3Q06889 387 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 C6orf141Q5SZD1 244 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 LAIR2Q6ISS4 152 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 ZNF544Q6NX49 715 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 DRAM2Q6UX65 266 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 COLCA1Q6ZS62 124 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 KRT77Q7Z794 578 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 EGFL6Q8IUX8 553 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 ZNF679Q8IYX0 411 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 ACBD7Q8N6N7 88 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 ZNF611Q8N823 705 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 SLC7A6Q92536 515 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 FBXW5Q969U6 566 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 LGALS12Q96DT0 336 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 COG8Q96MW5 612 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 AMELYQ99218 206 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 MYCBPQ99417 103 aaPredicted RBP11.49□□□□□ -0.57
COL4A6-207ENST00000487645 DHRS9Q9BPW9 319 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 COPS4Q9BT78 406 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 C1QTNF5Q9BXJ0 243 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 MROQ9BYG7 248 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 ZNF442Q9H7R0 627 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 AMBNQ9NP70 447 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 CA10Q9NS85 328 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 COPS3Q9UNS2 423 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 KLHDC2Q9Y2U9 406 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 GRIP1Q9Y3R0 1128 aa11.49□□□□□ -0.57
COL4A6-207ENST00000487645 A0A1W2PQL4 384 aaPredicted RBP11.48□□□□□ -0.57
COL4A6-207ENST00000487645 M0R135 149 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 DENRO43583 198 aaKnown RBP11.48□□□□□ -0.57
COL4A6-207ENST00000487645 ABHD16AO95870 558 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 HSD11B1P28845 292 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 WNT5AP41221 380 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 KRT80Q6KB66 452 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 ZNF322Q6U7Q0 402 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms