RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 WDR89Q96FK6 387 aaPredicted RBP23.29■■□□□ 1.32
HLA-C-208ENST00000487245 DEFB126Q9BYW3 111 aa23.29■■□□□ 1.32
HLA-C-208ENST00000487245 NXT1Q9UKK6 140 aaKnown RBP23.29■■□□□ 1.32
HLA-C-208ENST00000487245 RPH3AQ9Y2J0 694 aaPredicted RBP23.29■■□□□ 1.32
HLA-C-208ENST00000487245 MRPS18BQ9Y676 258 aaKnown RBP23.29■■□□□ 1.32
HLA-C-208ENST00000487245 PMS2P2O95744 297 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 IL11RAQ14626 422 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 HLXQ14774 488 aaPredicted RBP23.28■■□□□ 1.32
HLA-C-208ENST00000487245 C2orf68Q2NKX9 166 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 MRPL14Q6P1L8 145 aaKnown RBP23.28■■□□□ 1.32
HLA-C-208ENST00000487245 OR13C3Q8NGS6 347 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 EXO5Q9H790 373 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 WDR54Q9H977 334 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 EMC9Q9Y3B6 208 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 RHBDD3Q9Y3P4 386 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 B3GALT1Q9Y5Z6 326 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 LOC107986453A0A1B0GWG9 222 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 H3BUI4 141 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 CD74P04233 296 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 UBCP0CG48 685 aaKnown RBP23.28■■□□□ 1.32
HLA-C-208ENST00000487245 DCXRQ7Z4W1 244 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 NAXDQ8IW45 347 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 RELTQ969Z4 430 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 WBP1Q96G27 269 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 KLHL13Q9P2N7 655 aa23.28■■□□□ 1.32
HLA-C-208ENST00000487245 OR2J2O76002 312 aa23.27■■□□□ 1.32
HLA-C-208ENST00000487245 RAB3DO95716 219 aa23.27■■□□□ 1.32
HLA-C-208ENST00000487245 ZNF35P13682 527 aa23.27■■□□□ 1.32
HLA-C-208ENST00000487245 PPP3CBP16298 524 aa23.27■■□□□ 1.32
HLA-C-208ENST00000487245 FKBP2P26885 142 aaKnown RBP23.27■■□□□ 1.32
HLA-C-208ENST00000487245 TMUB2Q71RG4 321 aa23.27■■□□□ 1.32
HLA-C-208ENST00000487245 OR10H5Q8NGA6 315 aa23.27■■□□□ 1.32
HLA-C-208ENST00000487245 B8ZZF3 427 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 GOSR2O14653 212 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 FMODQ06828 376 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 PHF19Q5T6S3 580 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 HIST2H2ABQ8IUE6 130 aaPredicted RBP23.26■■□□□ 1.31
HLA-C-208ENST00000487245 OR10G3Q8NGC4 313 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 POC1BQ8TC44 478 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 RNF133Q8WVZ7 376 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 CDX2Q99626 313 aaPredicted RBP23.26■■□□□ 1.31
HLA-C-208ENST00000487245 NARFLQ9H6Q4 476 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 KCNN3Q9UGI6 736 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 TRIOBPQ9H2D6 2365 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 MEIS3P1A6NDR6 274 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 ZSCAN5BA6NJL1 495 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 H3BML4 177 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 H2BFMP0C1H6 154 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 MMP16P51512 607 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 LCN10Q6JVE6 187 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 C3orf33Q6P1S2 294 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 OR2M3Q8NG83 312 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 IFI44Q8TCB0 444 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 TNFAIP8L1Q8WVP5 186 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 SPACA9Q96E40 222 aaPredicted RBP23.26■■□□□ 1.31
HLA-C-208ENST00000487245 EDEM2Q9BV94 578 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 GAREM1Q9H706 876 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 MED29Q9NX70 200 aa23.26■■□□□ 1.31
HLA-C-208ENST00000487245 CGGBP1Q9UFW8 167 aaPredicted RBP23.26■■□□□ 1.31
HLA-C-208ENST00000487245 GPN3Q9UHW5 284 aaPredicted RBP23.26■■□□□ 1.31
HLA-C-208ENST00000487245 TNRC6BQ9UPQ9 1833 aaKnown RBP23.25■■□□□ 1.31
HLA-C-208ENST00000487245 ALPK2Q86TB3 2170 aa23.25■■□□□ 1.31
HLA-C-208ENST00000487245 EFNA2O43921 213 aa23.25■■□□□ 1.31
HLA-C-208ENST00000487245 RP2O75695 350 aa23.25■■□□□ 1.31
HLA-C-208ENST00000487245 ZNF735P0CB33 412 aa23.25■■□□□ 1.31
HLA-C-208ENST00000487245 ZNF250P15622 560 aa23.25■■□□□ 1.31
HLA-C-208ENST00000487245 BIDP55957 195 aa23.25■■□□□ 1.31
HLA-C-208ENST00000487245 GMFBP60983 142 aa23.25■■□□□ 1.31
HLA-C-208ENST00000487245 PMPCAQ10713 525 aa23.25■■□□□ 1.31
HLA-C-208ENST00000487245 MYBPHQ13203 477 aa23.25■■□□□ 1.31
HLA-C-208ENST00000487245 THEM4Q5T1C6 240 aa23.25■■□□□ 1.31
HLA-C-208ENST00000487245 ZNF627Q7L945 461 aa23.25■■□□□ 1.31
HLA-C-208ENST00000487245 OR51A2Q8NGJ7 313 aa23.25■■□□□ 1.31
HLA-C-208ENST00000487245 DVL3Q92997 716 aaPredicted RBP23.25■■□□□ 1.31
HLA-C-208ENST00000487245 RBPMSQ93062 196 aaKnown RBP23.25■■□□□ 1.31
HLA-C-208ENST00000487245 OCIAD1Q9NX40 245 aa23.25■■□□□ 1.31
HLA-C-208ENST00000487245 SDK1Q7Z5N4 2213 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 hCG_1807616A0A1W2PRN6 198 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 TP53I11O14683 189 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 SIX6O95475 246 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 LRFN4Q6PJG9 635 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 UEVLDQ8IX04 471 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 ELP5Q8TE02 316 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 SCARB1Q8WTV0 552 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 SLC25A43Q8WUT9 341 aaPredicted RBP23.24■■□□□ 1.31
HLA-C-208ENST00000487245 LOC102723996A0A087X1L8 192 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 TMEM269A0A1B0GVZ9 245 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 TMEM82A0PJX8 343 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 DKK1O94907 266 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 MPZP25189 248 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 BAMBIQ13145 260 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 TRA2AQ13595 282 aaKnown RBP eCLIP23.24■■□□□ 1.31
HLA-C-208ENST00000487245 KIF26BQ2KJY2 2108 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 DCAF12L2Q5VW00 463 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 RAB12Q6IQ22 244 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 GPAT4Q86UL3 456 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 OR8S1Q8NH09 359 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 RASL10BQ96S79 203 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 CHST6Q9GZX3 395 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 POFUT1Q9H488 388 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms