RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 ATP5HO75947 161 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 LRATO95237 230 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 CA1P00915 261 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-216ENST00000487043 PDYNP01213 254 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 ALOX5P09917 674 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 LINC00032P0C843 101 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 NCF2P19878 526 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-216ENST00000487043 PGCP20142 388 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 CXCR2P25025 360 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 HMOX2P30519 316 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 SHMT2P34897 504 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 ACVR1BP36896 505 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 ARRB1P49407 418 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-216ENST00000487043 UBE2IP63279 158 aaKnown RBP3.2□□□□□ -1.9
PTCD3-216ENST00000487043 EMX2Q04743 252 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 ANGPT1Q15389 498 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 VWA2Q5GFL6 755 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 XKR7Q5GH72 579 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 PAGE2BQ5JRK9 111 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 ZNF506Q5JVG8 444 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-216ENST00000487043 ZC2HC1BQ5TFG8 222 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 MEDAGQ5VYS4 303 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 LEMD1Q68G75 181 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 MED27Q6P2C8 311 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 STAC2Q6ZMT1 411 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 CCDC80Q76M96 950 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 TIPARPQ7Z3E1 657 aaKnown RBP3.2□□□□□ -1.9
PTCD3-216ENST00000487043 IFNEQ86WN2 208 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 CDH26Q8IXH8 852 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 ABHD12Q8N2K0 398 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 SLC25A45Q8N413 288 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 C2orf73Q8N5S3 287 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-216ENST00000487043 OR2T33Q8NG76 320 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 OR4E2Q8NGC2 313 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 LMX1AQ8TE12 382 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 LCN9Q8WX39 176 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 NEIL2Q969S2 332 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 UBE2E3Q969T4 207 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 C19orf60Q96EN9 201 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 PELI1Q96FA3 418 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 C7orf34Q96L11 122 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 PPP1R36Q96LQ0 422 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 PPP3R2Q96LZ3 170 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 CCNL2Q96S94 520 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-216ENST00000487043 NRTNQ99748 197 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 NMUR2Q9GZQ4 415 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 ADNPQ9H2P0 1102 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 SRMSQ9H3Y6 488 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 ELOVL6Q9H5J4 265 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 ZNF385DQ9H6B1 395 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 XKR8Q9H6D3 395 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 UCK1Q9HA47 277 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 AMBNQ9NP70 447 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 TIGARQ9NQ88 270 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 FAM120CQ9NX05 1096 aaKnown RBP3.2□□□□□ -1.9
PTCD3-216ENST00000487043 PIPOXQ9P0Z9 390 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 TAC3Q9UHF0 121 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 NTNG1Q9Y2I2 539 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 GON4LQ3T8J9 2241 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 TDRD6O60522 2096 aaKnown RBP3.2□□□□□ -1.9
PTCD3-216ENST00000487043 TNRC6BQ9UPQ9 1833 aaKnown RBP3.19□□□□□ -1.9
PTCD3-216ENST00000487043 FANCMQ8IYD8 2048 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 KNL1Q8NG31 2342 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 IGHV3OR16-10A0A075B7F0 116 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 TRAV26-1A0A087WT03 109 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 IGKV1-8A0A0C4DH67 115 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 A0A1B0GTQ1 180 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 SAGE2PA6NJ88 616 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 PCP4L1A6NKN8 68 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 C2orf74A8MZ97 194 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 E9PBE3 544 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 PSMD12O00232 456 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-216ENST00000487043 FOXE1O00358 373 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-216ENST00000487043 LSM1O15116 133 aaKnown RBP3.19□□□□□ -1.9
PTCD3-216ENST00000487043 YKT6O15498 198 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 KLHL41O60662 606 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 SERPINA3P01011 423 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 GIMD1P0DJR0 217 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 THRAP10827 490 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 UMPSP11172 480 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 IDO1P14902 403 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 CMPK1P30085 196 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 PEBP1P30086 187 aaKnown RBP3.19□□□□□ -1.9
PTCD3-216ENST00000487043 SERPINB1P30740 379 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 MRPL19P49406 292 aaKnown RBP3.19□□□□□ -1.9
PTCD3-216ENST00000487043 CEBPDP49716 269 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-216ENST00000487043 CCR8P51685 355 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 ARHGDIBP52566 201 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 DIO3P55073 304 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 ERVK11-1P61568 191 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 RPL8P62917 257 aaKnown RBP3.19□□□□□ -1.9
PTCD3-216ENST00000487043 CSNK1G2P78368 415 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 HMGCS1Q01581 520 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 RELAQ04206 551 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 PAX8Q06710 450 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 PUDPQ08623 228 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 SLC10A1Q14973 349 aa3.19□□□□□ -1.9
PTCD3-216ENST00000487043 KIAA0040Q15053 153 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms