RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CHRM4P08173 479 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 IGFBP1P08833 259 aaPredicted RBP3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 TFPTP0C1Z6 253 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 IL2RGP31785 369 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 S100A3P33764 101 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 CHI3L1P36222 383 aaPredicted RBP3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 ACAA2P42765 397 aaKnown RBP3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 CLNS1AP54105 237 aaKnown RBP3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 TMEM33P57088 247 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 ERVK11-1P61568 191 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 COPZ1P61923 177 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 ARF1P84077 181 aaKnown RBP3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 LGALS3BPQ08380 585 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 LRRC74AQ0VAA2 488 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 SCGB2A2Q13296 93 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 SYPL1Q16563 259 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 SLC9B1Q4ZJI4 515 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 SPANXN4Q5MJ08 99 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 MRPL2Q5T653 305 aaKnown RBP3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 C1orf140Q5VVS0 124 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 PRAMEF8Q5VWM4 474 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 PRAMEF7Q5VXH5 474 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 REP15Q6BDI9 236 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 NIPAL3Q6P499 406 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 LINGO2Q7L985 606 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 SPATA21Q7Z572 469 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 HMGN2P46Q86SG4 172 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 RNF130Q86XS8 419 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 PEX5LQ8IYB4 626 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 KIRREL3Q8IZU9 778 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 ZCCHC24Q8N2G6 241 aaKnown RBP3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 SVOPLQ8N434 492 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 RIBC1Q8N443 379 aaPredicted RBP3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 TEX29Q8N6K0 151 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 TRIML2Q8N7C3 387 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 MFSD8Q8NHS3 518 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 SGMS2Q8NHU3 365 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 KIF18AQ8NI77 898 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 TCP10LQ8TDR4 215 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 CKAP2Q8WWK9 683 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 SNAPC3Q92966 411 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 ZMYND19Q96E35 227 aaPredicted RBP3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 TMEM19Q96HH6 336 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 CCDC115Q96NT0 180 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 OXGR1Q96P68 337 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 SLC35A5Q9BS91 424 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 RACGAP1Q9H0H5 632 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 DYNLRB1Q9NP97 96 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 ADPRHL2Q9NX46 363 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 CALML5Q9NZT1 146 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 LGALS13Q9UHV8 139 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 CMAHPQ9Y471 501 aa3.36□□□□□ -1.87
SNRNP40-205ENST00000486941 TGP01266 2768 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 SH3PXD2BA1X283 911 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 ZNF99A8MXY4 864 aaPredicted RBP3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 FTCDNL1E5RQL4 147 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 E9PBE3 544 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 LYNX1G3V0Z9 82 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 TRIM77I1YAP6 450 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 EBAG9O00559 213 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 SYNGR3O43761 229 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 OR2T1O43869 369 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 TYROBPO43914 113 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 SPAG7O75391 227 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 AHSA1O95433 338 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 KRT75O95678 551 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 C1QCP02747 245 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 TFP02787 698 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 ADRA2AP08913 450 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 GKN3PP0CG01 181 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 LYNX1P0DP58 116 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 NR2F1P10589 423 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 PNMTP11086 282 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 ZNF35P13682 527 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 ANPEPP15144 967 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 ZNF43P17038 809 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 LBPP18428 481 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 ACHEP22303 614 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 COL8A2P25067 703 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 GLRXP35754 106 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 GPR6P46095 362 aaPredicted RBP3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 RPL14P50914 215 aaKnown RBP3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 CLDN17P56750 224 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 ABCE1P61221 599 aaKnown RBP3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 MRPS11P82912 194 aaKnown RBP3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 IL1RL1Q01638 556 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 BNIP2Q12982 314 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 TRIP10Q15642 601 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 MAPK11Q15759 364 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 PDCD2Q16342 344 aaPredicted RBP3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 CEACAM16Q2WEN9 425 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 FAM174BQ3ZCQ3 159 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 LIN52Q52LA3 116 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 ESCO2Q56NI9 601 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 ELFN2Q5R3F8 820 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 PGBD2Q6P3X8 592 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 C5orf46Q6UWT4 87 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 RINLQ6ZS11 566 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 ZNF621Q6ZSS3 439 aa3.35□□□□□ -1.87
SNRNP40-205ENST00000486941 NET1Q7Z628 596 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms