RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 NANOS3P60323 173 aaKnown RBP11.89□□□□□ -0.51
HMGN1-216ENST00000486741 PRR18Q8N4B5 295 aa11.89□□□□□ -0.51
HMGN1-216ENST00000486741 MAFIPQ8WZ33 124 aa11.89□□□□□ -0.51
HMGN1-216ENST00000486741 ZBTB8AQ96BR9 441 aa11.89□□□□□ -0.51
HMGN1-216ENST00000486741 MRGPRX4Q96LA9 322 aa11.89□□□□□ -0.51
HMGN1-216ENST00000486741 C4orf45Q96LM5 186 aa11.89□□□□□ -0.51
HMGN1-216ENST00000486741 LRFN1Q9P244 771 aa11.89□□□□□ -0.51
HMGN1-216ENST00000486741 GDF2Q9UK05 429 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-216ENST00000486741 BOKQ9UMX3 212 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-216ENST00000486741 STMND1H3BQB6 276 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 CCSO14618 274 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 DOC2BQ14184 412 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 CDK10Q15131 360 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 RAB12Q6IQ22 244 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 DHRS13Q6UX07 377 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 MOB3CQ70IA8 216 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 SLC22A24Q8N4F4 322 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 ZNF565Q8N9K5 539 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 OR52B4Q8NGK2 314 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 STK35Q8TDR2 534 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 TTC9Q92623 222 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 MCTS1Q9ULC4 181 aaKnown RBP11.88□□□□□ -0.51
HMGN1-216ENST00000486741 B3GALT1Q9Y5Z6 326 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 PLPP3O14495 311 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 ZNF35P13682 527 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 DLSTP36957 453 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 RFX2P48378 723 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 SLC25A1P53007 311 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 ELP2Q6IA86 826 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 ADGRE4PQ86SQ3 457 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 VASH2Q86V25 355 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 CNEP1R1Q8N9A8 125 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 FOXRED1Q96CU9 486 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-216ENST00000486741 SLA2Q9H6Q3 261 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 C12orf49Q9H741 205 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 AKIRIN1Q9H9L7 192 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-216ENST00000486741 OR5V1Q9UGF6 321 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 NOSIPQ9Y314 301 aaKnown RBP11.88□□□□□ -0.51
HMGN1-216ENST00000486741 A0A096LPE4 126 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 A0A1W2PPZ6 126 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 SHISA3A0PJX4 238 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 TIAF1O95411 115 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 RAF1P04049 648 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 HOXB5P09067 269 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 CLDN20P56880 219 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 ALKAL2Q6UX46 152 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 MRPL21Q7Z2W9 205 aaKnown RBP11.88□□□□□ -0.51
HMGN1-216ENST00000486741 DND1Q8IYX4 353 aaKnown RBP11.88□□□□□ -0.51
HMGN1-216ENST00000486741 FAM109AQ8N4B1 249 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 SLC25A43Q8WUT9 341 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-216ENST00000486741 RASL10BQ96S79 203 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 MRPS18AQ9NVS2 196 aaKnown RBP11.88□□□□□ -0.51
HMGN1-216ENST00000486741 PLA2G3Q9NZ20 509 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 ETV7Q9Y603 341 aa11.88□□□□□ -0.51
HMGN1-216ENST00000486741 A0A1B0GTQ1 180 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 YKT6O15498 198 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 EIF1BO60739 113 aaKnown RBP11.87□□□□□ -0.51
HMGN1-216ENST00000486741 OR7C1O76099 320 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-216ENST00000486741 MALLQ13021 153 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 SMUG1Q53HV7 270 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 WIPI1Q5MNZ9 446 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-216ENST00000486741 HACD4Q5VWC8 232 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 PLCXD3Q63HM9 321 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 C1orf210Q8IVY1 113 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 OR6F1Q8NGZ6 308 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 OR4K15Q8NH41 348 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 PBOV1Q9GZY1 135 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 EHFQ9NZC4 300 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 NPAP1Q9NZP6 1156 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 PI3P19957 117 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 RHOUQ7L0Q8 258 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 GJC3Q8NFK1 279 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 MFSD8Q8NHS3 518 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 CMBLQ96DG6 245 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 CPNE2Q96FN4 548 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-216ENST00000486741 CDC6Q99741 560 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 PIGLQ9Y2B2 252 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 MEMO1Q9Y316 297 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 R4GMQ9 66 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 TRAV8-7A0A075B6U6 113 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 B3GALNT1O75752 331 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 PATE4P0C8F1 98 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 BTN1A1Q13410 526 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 FZD5Q13467 585 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 WDR74Q6RFH5 385 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-216ENST00000486741 FAM198BQ6UWH4 519 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 TMPPEQ6ZT21 453 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 OR4S1Q8NGB4 309 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 MED30Q96HR3 178 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 PAPOLGQ9BWT3 736 aaKnown RBP11.87□□□□□ -0.51
HMGN1-216ENST00000486741 HAO2Q9NYQ3 351 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 NTMQ9P121 344 aa11.87□□□□□ -0.51
HMGN1-216ENST00000486741 ACHEP22303 614 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 PTBP1P26599 531 aaKnown RBP eCLIP11.86□□□□□ -0.51
HMGN1-216ENST00000486741 ZNF121P58317 390 aaPredicted RBP11.86□□□□□ -0.51
HMGN1-216ENST00000486741 ACACAQ13085 2346 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 LINC00303Q3SY05 128 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 THEM4Q5T1C6 240 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 MAML2Q8IZL2 1156 aaPredicted RBP11.86□□□□□ -0.51
HMGN1-216ENST00000486741 STEAP2Q8NFT2 490 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms