RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	MDH1	P40925	334 aa	Known RBP	11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	PSME3	P61289	254 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	TMEM155	Q4W5P6	130 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	ESCO2	Q56NI9	601 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	SMARCD3	Q6STE5	483 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	ZNF283	Q8N7M2	679 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	OR52J3	Q8NH60	311 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	SGMS2	Q8NHU3	365 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	FANK1	Q8TC84	345 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	C22orf15	Q8WYQ4	148 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	SLC7A6	Q92536	515 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	POP5	Q969H6	163 aa	Known RBP	11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	MCUR1	Q96AQ8	359 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	HAVCR1	Q96D42	359 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	ZNF582	Q96NG8	517 aa	Predicted RBP	11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	ERMAP	Q96PL5	475 aa	Predicted RBP	11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	OR2V2	Q96R30	315 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	GPX7	Q96SL4	187 aa	Predicted RBP	11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	CDADC1	Q9BWV3	514 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	NUAK2	Q9H093	628 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	POFUT1	Q9H488	388 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	PATZ1	Q9HBE1	687 aa	Known RBP	11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	SPAG4	Q9NPE6	437 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	MED4	Q9NPJ6	270 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	ESM1	Q9NQ30	184 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	VSX1	Q9NZR4	365 aa	Predicted RBP	11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	OR5V1	Q9UGF6	321 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	ATPIF1	Q9UII2	106 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	AUP1	Q9Y679	476 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424		V9GYQ6	96 aa		11.18	□□□□□ -0.62
UBA3-210	ENST00000485424	PPIAL4E	A0A075B759	164 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	PPIAL4C	A0A0B4J2A2	164 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	PPIAL4D	F5H284	164 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	RER1	O15258	196 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	GADD45G	O95257	159 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	PPP1R3D	O95685	299 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	HLA-DQA2	P01906	255 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	PPIAL4F	P0DN26	164 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	SLC6A6	P31641	620 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	MDH2	P40926	338 aa	Known RBP	11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	OMP	P47874	163 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	SRP9	P49458	86 aa	Known RBP	11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	SPIB	Q01892	262 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	AWAT1	Q58HT5	328 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	SPRN	Q5BIV9	151 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	OTP	Q5XKR4	325 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	C8orf82	Q6P1X6	216 aa	Predicted RBP	11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	LEG1	Q6P5S2	330 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	OR2AJ1	Q8NGZ0	328 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	OR13G1	Q8NGZ3	307 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	HCAR1	Q9BXC0	346 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	NSRP1	Q9H0G5	558 aa	Known RBP	11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	HDHD2	Q9H0R4	259 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	NDUFAF4	Q9P032	175 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	ABCD2	Q9UBJ2	740 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	PPIAL4A	Q9Y536	164 aa		11.17	□□□□□ -0.62
UBA3-210	ENST00000485424	WNK1	Q9H4A3	2382 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	NOTCH1	P46531	2555 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	LRRC30	A6NM36	301 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	KCNAB3	O43448	404 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	PTP4A3	O75365	173 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	DIRAS1	O95057	198 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	FSHB	P01225	129 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	DBH	P09172	617 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	IRF2	P14316	349 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	RPS2	P15880	293 aa	Known RBP	11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	SELE	P16581	610 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	ZNF26	P17031	533 aa	Predicted RBP	11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	IFNGR2	P38484	337 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	HLX	Q14774	488 aa	Predicted RBP	11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	SLC36A3	Q495N2	470 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	CCDC92	Q53HC0	331 aa	Predicted RBP	11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	OR2T2	Q6IF00	324 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424		Q6ZR03	302 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	PTCHD4	Q6ZW05	846 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	LRRC28	Q86X40	367 aa	Predicted RBP	11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	C1orf87	Q8N0U7	546 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	ZDHHC22	Q8N966	263 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	OR8G5	Q8NG78	346 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	PLEKHA8	Q96JA3	519 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	GPA33	Q99795	319 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	COQ7	Q99807	217 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	ELAC2	Q9BQ52	826 aa	Known RBP	11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	IFT27	Q9BW83	186 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	FAM107B	Q9H098	131 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	SRA1	Q9HD15	236 aa	Known RBP	11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	DCAF13	Q9NV06	445 aa	Known RBP	11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	DCAF16	Q9NXF7	216 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	NUP50	Q9UKX7	468 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	TMCC3	Q9ULS5	477 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	LRCH1	Q9Y2L9	728 aa		11.16	□□□□□ -0.62
UBA3-210	ENST00000485424	TRBV4-1	A0A0J9YWV2	114 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	OR10H3	O60404	316 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	ZFP36	P26651	326 aa	Known RBP	11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	PRDX6	P30041	224 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	CDKN2A	P42771	156 aa	Known RBP	11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	RAD23A	P54725	363 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	GNB2	P62879	340 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	MALL	Q13021	153 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms