RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 HIST2H3PS2Q5TEC6 136 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 HIST2H3AQ71DI3 136 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 WDYHV1Q96HA8 205 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 FBXL3Q9UKT7 428 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 NOSIPQ9Y314 301 aaKnown RBP23.15■■□□□ 1.3
SHOX2-204ENST00000483851 UBCP0CG48 685 aaKnown RBP23.14■■□□□ 1.29
SHOX2-204ENST00000483851 SLC2A2P11168 524 aaPredicted RBP23.14■■□□□ 1.29
SHOX2-204ENST00000483851 CTSSP25774 331 aa23.14■■□□□ 1.29
SHOX2-204ENST00000483851 OR10A3P58181 314 aa23.14■■□□□ 1.29
SHOX2-204ENST00000483851 GRB2P62993 217 aaKnown RBP23.14■■□□□ 1.29
SHOX2-204ENST00000483851 TMEM244Q5VVB8 128 aa23.14■■□□□ 1.29
SHOX2-204ENST00000483851 KCNJ15Q99712 375 aa23.14■■□□□ 1.29
SHOX2-204ENST00000483851 SCNM1Q9BWG6 230 aa23.14■■□□□ 1.29
SHOX2-204ENST00000483851 PRRG4Q9BZD6 226 aa23.14■■□□□ 1.29
SHOX2-204ENST00000483851 GP6Q9HCN6 339 aa23.14■■□□□ 1.29
SHOX2-204ENST00000483851 TCF7L1Q9HCS4 588 aa23.14■■□□□ 1.29
SHOX2-204ENST00000483851 DDX28Q9NUL7 540 aaKnown RBP23.14■■□□□ 1.29
SHOX2-204ENST00000483851 ABRACLQ9P1F3 81 aa23.14■■□□□ 1.29
SHOX2-204ENST00000483851 MALT1Q9UDY8 824 aa23.14■■□□□ 1.29
SHOX2-204ENST00000483851 SLC22A13Q9Y226 551 aa23.14■■□□□ 1.29
SHOX2-204ENST00000483851 LINC00854A0A1B0GVQ3 168 aa23.13■■□□□ 1.29
SHOX2-204ENST00000483851 A0A1W2PPK0 400 aa23.13■■□□□ 1.29
SHOX2-204ENST00000483851 MRPL33O75394 65 aaKnown RBP23.13■■□□□ 1.29
SHOX2-204ENST00000483851 ACHEP22303 614 aa23.13■■□□□ 1.29
SHOX2-204ENST00000483851 ENDOGQ14249 297 aaKnown RBP23.13■■□□□ 1.29
SHOX2-204ENST00000483851 NRN1LQ496H8 165 aa23.13■■□□□ 1.29
SHOX2-204ENST00000483851 LRRC28Q86X40 367 aaPredicted RBP23.13■■□□□ 1.29
SHOX2-204ENST00000483851 ZNF775Q96BV0 537 aaPredicted RBP23.13■■□□□ 1.29
SHOX2-204ENST00000483851 WACQ9BTA9 647 aa23.13■■□□□ 1.29
SHOX2-204ENST00000483851 PNRC2Q9NPJ4 139 aaKnown RBP23.13■■□□□ 1.29
SHOX2-204ENST00000483851 FAM206AQ9NX38 181 aa23.13■■□□□ 1.29
SHOX2-204ENST00000483851 GTF2A1LQ9UNN4 478 aa23.13■■□□□ 1.29
SHOX2-204ENST00000483851 WASF3Q9UPY6 502 aa23.13■■□□□ 1.29
SHOX2-204ENST00000483851 EPXP11678 715 aa23.13■■□□□ 1.29
SHOX2-204ENST00000483851 PSMA6P60900 246 aaKnown RBP23.13■■□□□ 1.29
SHOX2-204ENST00000483851 MADCAM1Q13477 382 aa23.13■■□□□ 1.29
SHOX2-204ENST00000483851 IL18Q14116 193 aa23.13■■□□□ 1.29
SHOX2-204ENST00000483851 TMEM106AQ96A25 262 aa23.13■■□□□ 1.29
SHOX2-204ENST00000483851 ZC3HAV1LQ96H79 300 aaKnown RBP23.13■■□□□ 1.29
SHOX2-204ENST00000483851 MRI1Q9BV20 369 aa23.13■■□□□ 1.29
SHOX2-204ENST00000483851 CRLF2Q9HC73 371 aa23.13■■□□□ 1.29
SHOX2-204ENST00000483851 HHLA2Q9UM44 414 aa23.13■■□□□ 1.29
SHOX2-204ENST00000483851 ZNF175Q9Y473 711 aa23.13■■□□□ 1.29
SHOX2-204ENST00000483851 A0A1B0GVC2 190 aa23.12■■□□□ 1.29
SHOX2-204ENST00000483851 CD2P06729 351 aa23.12■■□□□ 1.29
SHOX2-204ENST00000483851 HSD11B1P28845 292 aa23.12■■□□□ 1.29
SHOX2-204ENST00000483851 TAF13Q15543 124 aa23.12■■□□□ 1.29
SHOX2-204ENST00000483851 BCL2L15Q5TBC7 163 aa23.12■■□□□ 1.29
SHOX2-204ENST00000483851 TMEM38BQ9NVV0 291 aa23.12■■□□□ 1.29
SHOX2-204ENST00000483851 SPRR3Q9UBC9 169 aa23.12■■□□□ 1.29
SHOX2-204ENST00000483851 MSRB2Q9Y3D2 182 aa23.12■■□□□ 1.29
SHOX2-204ENST00000483851 PHF3Q92576 2039 aaKnown RBP23.12■■□□□ 1.29
SHOX2-204ENST00000483851 A0A087WV48 116 aa23.11■■□□□ 1.29
SHOX2-204ENST00000483851 CST2P09228 141 aa23.11■■□□□ 1.29
SHOX2-204ENST00000483851 FAM157BP0CG42 384 aa23.11■■□□□ 1.29
SHOX2-204ENST00000483851 KIR2DL3P43628 341 aa23.11■■□□□ 1.29
SHOX2-204ENST00000483851 ELMOD2Q8IZ81 293 aa23.11■■□□□ 1.29
SHOX2-204ENST00000483851 FNDC9Q8TBE3 224 aa23.11■■□□□ 1.29
SHOX2-204ENST00000483851 TSEN15Q8WW01 171 aaKnown RBP23.11■■□□□ 1.29
SHOX2-204ENST00000483851 MMP28Q9H239 520 aa23.11■■□□□ 1.29
SHOX2-204ENST00000483851 SLCO5A1Q9H2Y9 848 aa23.11■■□□□ 1.29
SHOX2-204ENST00000483851 NUFIP1Q9UHK0 495 aaKnown RBP23.11■■□□□ 1.29
SHOX2-204ENST00000483851 ZNF407Q9C0G0 2248 aa23.11■■□□□ 1.29
SHOX2-204ENST00000483851 RER1O15258 196 aa23.11■■□□□ 1.29
SHOX2-204ENST00000483851 YES1P07947 543 aa23.11■■□□□ 1.29
SHOX2-204ENST00000483851 SLC25A35Q3KQZ1 300 aa23.11■■□□□ 1.29
SHOX2-204ENST00000483851 TRIQKQ629K1 86 aa23.11■■□□□ 1.29
SHOX2-204ENST00000483851 STAC2Q6ZMT1 411 aa23.11■■□□□ 1.29
SHOX2-204ENST00000483851 EXTL2Q9UBQ6 330 aa23.11■■□□□ 1.29
SHOX2-204ENST00000483851 DHDHQ9UQ10 334 aa23.11■■□□□ 1.29
SHOX2-204ENST00000483851 DNAJC13O75165 2243 aa23.1■■□□□ 1.29
SHOX2-204ENST00000483851 EIF4EP06730 217 aaKnown RBP23.1■■□□□ 1.29
SHOX2-204ENST00000483851 FCGR2AP12318 317 aa23.1■■□□□ 1.29
SHOX2-204ENST00000483851 SOX2P48431 317 aa23.1■■□□□ 1.29
SHOX2-204ENST00000483851 ZNF169Q14929 603 aaPredicted RBP23.1■■□□□ 1.29
SHOX2-204ENST00000483851 SYT9Q86SS6 491 aa23.1■■□□□ 1.29
SHOX2-204ENST00000483851 OR10AC1Q8NH08 325 aa23.1■■□□□ 1.29
SHOX2-204ENST00000483851 CMTM3Q96MX0 182 aa23.1■■□□□ 1.29
SHOX2-204ENST00000483851 PRDM14Q9GZV8 571 aa23.1■■□□□ 1.29
SHOX2-204ENST00000483851 GPR35Q9HC97 309 aa23.1■■□□□ 1.29
SHOX2-204ENST00000483851 MEIOCA2RUB1 952 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 FAM25AB3EWG3 89 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 FAM25CB3EWG5 89 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 FAM25GB3EWG6 89 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 RPL36A-HNRNPH2H7BZ11 118 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 PMP22Q01453 160 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 MCEMP1Q8IX19 187 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 OR4M1Q8NGD0 313 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 OR51A4Q8NGJ6 313 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 OR6F1Q8NGZ6 308 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 ASB5Q8WWX0 329 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 AK6Q9Y3D8 172 aaKnown RBP23.09■■□□□ 1.29
SHOX2-204ENST00000483851 V9GY05 133 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 TTLL8A6PVC2 850 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 AQP7O14520 342 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 APOC1P02654 83 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 MAP2K3P46734 347 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 C19orf18Q8NEA5 215 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 DUSP18Q8NEJ0 188 aa23.09■■□□□ 1.29
SHOX2-204ENST00000483851 FOXB1Q99853 325 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms