RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 R4GMQ9 66 aa13.29□□□□□ -0.28
ATG4B-220ENST00000482507 SPDEFO95238 335 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 SLC26A5P58743 744 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 KIF26BQ2KJY2 2108 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 GUSBP11Q6P575 273 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 LRFN4Q6PJG9 635 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 DCXRQ7Z4W1 244 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 NAXDQ8IW45 347 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 JAGN1Q8N5M9 183 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 SLC26A10Q8NG04 563 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 OR1N1Q8NGS0 311 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 OR13C8Q8NGS7 320 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 ST7LQ8TDW4 575 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 ARL5BQ96KC2 179 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 SLC6A7Q99884 636 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 VN1R1Q9GZP7 353 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 MFFQ9GZY8 342 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 FAM86C1Q9NVL1 165 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 CKLFQ9UBR5 152 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 ZFHX2Q9C0A1 2572 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-220ENST00000482507 IGHV3-20A0A0C4DH32 117 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 LNP1A1A4G5 178 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 ZNF354AO60765 605 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-220ENST00000482507 CD2P06729 351 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 LIPCP11150 499 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 FOLR1P15328 257 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 RPA2P15927 270 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 PTGS2P35354 604 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 NUP62P37198 522 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-220ENST00000482507 PNLIPRP2P54317 469 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 GLO1Q04760 184 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 GRINAQ7Z429 371 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 ADGRE4PQ86SQ3 457 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 RTN4RL2Q86UN3 420 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 C12orf45Q8N5I9 185 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-220ENST00000482507 ACBD4Q8NC06 268 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 RELL2Q8NC24 303 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-220ENST00000482507 SHARPINQ9H0F6 387 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 WDR13Q9H1Z4 485 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 MED11Q9P086 117 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 OR52A1Q9UKL2 312 aa13.28□□□□□ -0.28
ATG4B-220ENST00000482507 FARSAQ9Y285 508 aaKnown RBP13.28□□□□□ -0.28
ATG4B-220ENST00000482507 COL5A1P20908 1838 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-220ENST00000482507 UNC13CQ8NB66 2214 aa13.27□□□□□ -0.28
ATG4B-220ENST00000482507 FER1L5A0AVI2 2057 aa13.27□□□□□ -0.28
ATG4B-220ENST00000482507 TNRC6BQ9UPQ9 1833 aaKnown RBP13.27□□□□□ -0.28
ATG4B-220ENST00000482507 LY6G6EA0A0G2JKS1 128 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 RFPL4AA6NLU0 287 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 RFPL4AL1F8VTS6 287 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 SULT1C2O00338 296 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 PMS2P2O95744 297 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 FGF2P09038 288 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 GLB1P16278 677 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 TAGLNQ01995 201 aaKnown RBP13.27□□□□□ -0.29
ATG4B-220ENST00000482507 CDH26Q8IXH8 852 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 MRGPRFQ96AM1 343 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 CMBLQ96DG6 245 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 ZDHHC12Q96GR4 267 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 PPA2Q9H2U2 334 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 GPR160Q9UJ42 338 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 MKL2Q9ULH7 1088 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 ATXN7L1Q9ULK2 861 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-220ENST00000482507 HHLA2Q9UM44 414 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 HRH3Q9Y5N1 445 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 U3KQA8 63 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 TRIM77I1YAP6 450 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 P2RY10O00398 339 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 CDK2AP1O14519 115 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 NUDT21O43809 227 aaKnown RBP13.27□□□□□ -0.29
ATG4B-220ENST00000482507 SNAPC5O75971 98 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 AHSA1O95433 338 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 CD74P04233 296 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 CSN2P05814 226 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 FBLP22087 321 aaKnown RBP13.27□□□□□ -0.29
ATG4B-220ENST00000482507 DNASE1L1P49184 302 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 TCF15Q12870 199 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 BAMBIQ13145 260 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 BTN1A1Q13410 526 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 NKPD1Q17RQ9 610 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 SLC22A6Q4U2R8 563 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 OVCH2Q7RTZ1 564 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 STEAP2Q8NFT2 490 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 OR5M9Q8NGP3 310 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 OR6K3Q8NGY3 331 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 DAZLQ92904 295 aaKnown RBP13.27□□□□□ -0.29
ATG4B-220ENST00000482507 LRFN3Q9BTN0 628 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 EDEM2Q9BV94 578 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 ZNF304Q9HCX3 659 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 CTSFQ9UBX1 484 aa13.27□□□□□ -0.29
ATG4B-220ENST00000482507 MUC6Q6W4X9 2439 aa13.26□□□□□ -0.29
ATG4B-220ENST00000482507 IGHV1OR21-1A0A087WYE8 117 aa13.26□□□□□ -0.29
ATG4B-220ENST00000482507 LOC390937A0A1W2PQ73 354 aa13.26□□□□□ -0.29
ATG4B-220ENST00000482507 ZNF736B4DX44 427 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-220ENST00000482507 DHRS2Q13268 280 aa13.26□□□□□ -0.29
ATG4B-220ENST00000482507 C1orf100Q5SVJ3 147 aa13.26□□□□□ -0.29
ATG4B-220ENST00000482507 SLC29A4Q7RTT9 530 aa13.26□□□□□ -0.29
ATG4B-220ENST00000482507 BPIFB2Q8N4F0 458 aa13.26□□□□□ -0.29
ATG4B-220ENST00000482507 ZNF454Q8N9F8 522 aa13.26□□□□□ -0.29
ATG4B-220ENST00000482507 BVESQ8NE79 360 aa13.26□□□□□ -0.29
ATG4B-220ENST00000482507 ASB10Q8WXI3 467 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms