RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 TBC1D23Q9NUY8 699 aa16.91■□□□□ 0.3
MSH5-215ENST00000482280 PRPF19Q9UMS4 504 aaKnown RBP16.91■□□□□ 0.3
MSH5-215ENST00000482280 STARD10Q9Y365 291 aa16.91■□□□□ 0.3
MSH5-215ENST00000482280 WIPI2Q9Y4P8 454 aa16.91■□□□□ 0.3
MSH5-215ENST00000482280 LYVE1Q9Y5Y7 322 aa16.91■□□□□ 0.3
MSH5-215ENST00000482280 CDH10Q9Y6N8 788 aa16.91■□□□□ 0.3
MSH5-215ENST00000482280 YLPM1P49750 1951 aaKnown RBP16.9■□□□□ 0.3
MSH5-215ENST00000482280 CD55P08174 381 aa16.9■□□□□ 0.3
MSH5-215ENST00000482280 RAC2P15153 192 aa16.9■□□□□ 0.3
MSH5-215ENST00000482280 ATP6V1B2P21281 511 aa16.9■□□□□ 0.3
MSH5-215ENST00000482280 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.9■□□□□ 0.3
MSH5-215ENST00000482280 ECH1Q13011 328 aa16.9■□□□□ 0.3
MSH5-215ENST00000482280 TRIM25Q14258 630 aaKnown RBP16.9■□□□□ 0.3
MSH5-215ENST00000482280 CCDC92Q53HC0 331 aaPredicted RBP16.9■□□□□ 0.3
MSH5-215ENST00000482280 FAHD2BQ6P2I3 314 aaPredicted RBP16.9■□□□□ 0.3
MSH5-215ENST00000482280 PROKR2Q8NFJ6 384 aa16.9■□□□□ 0.3
MSH5-215ENST00000482280 OR2T4Q8NH00 348 aa16.9■□□□□ 0.3
MSH5-215ENST00000482280 HAVCR1Q96D42 359 aa16.9■□□□□ 0.3
MSH5-215ENST00000482280 FAHD2AQ96GK7 314 aa16.9■□□□□ 0.3
MSH5-215ENST00000482280 HCAR1Q9BXC0 346 aa16.9■□□□□ 0.3
MSH5-215ENST00000482280 EGLN3Q9H6Z9 239 aa16.9■□□□□ 0.3
MSH5-215ENST00000482280 PCDHB10Q9UN67 800 aa16.9■□□□□ 0.3
MSH5-215ENST00000482280 SAMHD1Q9Y3Z3 626 aaKnown RBP16.9■□□□□ 0.3
MSH5-215ENST00000482280 IGLV1-36A0A0B4J1U3 117 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 FAM157AC9JC47 383 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 WNT9BO14905 357 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 GPANK1O95872 356 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 KITLGP21583 273 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 HMGA2P52926 109 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 COX10Q12887 443 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 LCN8Q6JVE9 175 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 SLC27A4Q6P1M0 643 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 CORO6Q6QEF8 472 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 ATG16L2Q8NAA4 619 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 SLC26A10Q8NG04 563 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 OR9Q2Q8NGE9 314 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 ST7LQ8TDW4 575 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 CCDC124Q96CT7 223 aaKnown RBP16.89■□□□□ 0.29
MSH5-215ENST00000482280 ZNF582Q96NG8 517 aaPredicted RBP16.89■□□□□ 0.29
MSH5-215ENST00000482280 UBAP1Q9NZ09 502 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 PTTG3PQ9NZH4 202 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 KCNG2Q9UJ96 466 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 METRNQ9UJH8 293 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 KLHL21Q9UJP4 597 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 LHFPL6Q9Y693 200 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 CACNG2Q9Y698 323 aa16.89■□□□□ 0.29
MSH5-215ENST00000482280 DCTN6O00399 190 aa16.88■□□□□ 0.29
MSH5-215ENST00000482280 DBHP09172 617 aa16.88■□□□□ 0.29
MSH5-215ENST00000482280 LMO4P61968 165 aa16.88■□□□□ 0.29
MSH5-215ENST00000482280 MALLQ13021 153 aa16.88■□□□□ 0.29
MSH5-215ENST00000482280 CDK5R2Q13319 367 aa16.88■□□□□ 0.29
MSH5-215ENST00000482280 OR2T5Q6IEZ7 315 aa16.88■□□□□ 0.29
MSH5-215ENST00000482280 ZBTB46Q86UZ6 589 aa16.88■□□□□ 0.29
MSH5-215ENST00000482280 AQP11Q8NBQ7 271 aa16.88■□□□□ 0.29
MSH5-215ENST00000482280 OR2T29Q8NH02 315 aa16.88■□□□□ 0.29
MSH5-215ENST00000482280 ATF6BQ99941 703 aa16.88■□□□□ 0.29
MSH5-215ENST00000482280 FN3KQ9H479 309 aa16.88■□□□□ 0.29
MSH5-215ENST00000482280 IL19Q9UHD0 177 aa16.88■□□□□ 0.29
MSH5-215ENST00000482280 BAIAP2Q9UQB8 552 aa16.88■□□□□ 0.29
MSH5-215ENST00000482280 U3KQV3 271 aa16.88■□□□□ 0.29
MSH5-215ENST00000482280 A0A0G2JMP0 313 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 A0A0X1KG70 313 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 OR6C68A6NDL8 312 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 F5H5K5 113 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 TCF21O43680 179 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 UBOX5O94941 541 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 IFNGP01579 166 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 SELEP16581 610 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 MAGEA2P43356 314 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 RASSF6Q6ZTQ3 369 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 ZNF771Q7L3S4 317 aaPredicted RBP16.87■□□□□ 0.29
MSH5-215ENST00000482280 LINC00346Q8IVM7 164 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 OR5AS1Q8N127 324 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 RFLNBQ8N5W9 214 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 OR4M2Q8NGB6 313 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 OR13G1Q8NGZ3 307 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 SPTSSAQ969W0 71 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 ASB9Q96DX5 294 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 POFUT1Q9H488 388 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 OCEL1Q9H607 264 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 PPP1R3CQ9UQK1 317 aa16.87■□□□□ 0.29
MSH5-215ENST00000482280 GNGT2O14610 69 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 PNPP00491 289 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 GASTP01350 101 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 TPTEP56180 551 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 HIST1H3AP68431 136 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 HLXQ14774 488 aaPredicted RBP16.86■□□□□ 0.29
MSH5-215ENST00000482280 MICAQ29983 383 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 TMEM255AQ5JRV8 349 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 HIST2H3PS2Q5TEC6 136 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 SLC18B1Q6NT16 456 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 FBXW12Q6X9E4 464 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 HIST2H3AQ71DI3 136 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 KLHL36Q8N4N3 616 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 SPICQ8N5J4 248 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 OR2T33Q8NG76 320 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 OR4C15Q8NGM1 316 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 BTBD10Q9BSF8 475 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 REPIN1Q9BWE0 567 aaKnown RBP16.86■□□□□ 0.29
MSH5-215ENST00000482280 TSSK6Q9BXA6 273 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms