RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 FNDC8Q8TC99 324 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 RBP7Q96R05 134 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 ZNF426Q9BUY5 554 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 ALG12Q9BV10 488 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 SEMA6AQ9H2E6 1030 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 PTTG3PQ9NZH4 202 aa12.31□□□□□ -0.44
HDAC6-224ENST00000481929 K7EIL1 84 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 SGCEO43556 437 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 HOXB9P17482 250 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-224ENST00000481929 FUT1P19526 365 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 GATA4P43694 442 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 SCRN3Q0VDG4 424 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 STX3Q13277 289 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 TOP3AQ13472 1001 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-224ENST00000481929 NSUN5P1Q3KNT7 163 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 FBXW12Q6X9E4 464 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 FOXL2NBQ6ZUU3 175 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 IGFN1Q86VF2 1251 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 LYG1Q8N1E2 194 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 C10orf111Q8N326 155 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 EIF1ADQ8N9N8 165 aaKnown RBP12.3□□□□□ -0.44
HDAC6-224ENST00000481929 OR9I1Q8NGQ6 314 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 Q8TCH9 128 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 NPRL2Q8WTW4 380 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 WACQ9BTA9 647 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 PCDHAC1Q9H158 963 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 TXNIPQ9H3M7 391 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 TMEM38AQ9H6F2 299 aa12.3□□□□□ -0.44
HDAC6-224ENST00000481929 MEPEQ9NQ76 525 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-224ENST00000481929 TRPC5OSA6NMA1 111 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 J3QW42 95 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 ADAM20O43506 726 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 FAM20BO75063 409 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 OR7A10O76100 309 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 BGNP21810 368 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 PPIBP23284 216 aaKnown RBP12.29□□□□□ -0.44
HDAC6-224ENST00000481929 EMX1Q04741 257 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-224ENST00000481929 IFFO1Q0D2I5 559 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 VMO1Q7Z5L0 202 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 BHLHE23Q8NDY6 225 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 OR5L1Q8NGL2 311 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 OR4C13Q8NGP0 309 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 OR2T6Q8NHC8 308 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 MOSPD2Q8NHP6 518 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 ERGIC1Q969X5 290 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 RASD2Q96D21 266 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 R3HDM4Q96D70 268 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 SMURF1Q9HCE7 757 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 POLE4Q9NR33 117 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 SDR39U1Q9NRG7 319 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-224ENST00000481929 SLC25A37Q9NYZ2 338 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 KPTNQ9Y664 436 aa12.29□□□□□ -0.44
HDAC6-224ENST00000481929 A0A1B0GVI7 797 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 HDAC3O15379 428 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 PAHP00439 452 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 MT-ND1P03886 318 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 FPR3P25089 353 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 KIR2DS4P43632 304 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 RGS6P49758 472 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 CDONQ4KMG0 1287 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 DEFB121Q5J5C9 76 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 CLEC12AQ5QGZ9 265 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 INTS11Q5TA45 600 aaKnown RBP12.28□□□□□ -0.44
HDAC6-224ENST00000481929 BTN2A1Q7KYR7 527 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 RBM45Q8IUH3 476 aaKnown RBP12.28□□□□□ -0.44
HDAC6-224ENST00000481929 PCYOX1LQ8NBM8 494 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 OR4F17Q8NGA8 305 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 SLC7A6Q92536 515 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 SGTBQ96EQ0 304 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 OR4F4Q96R69 305 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 OCSTAMPQ9BR26 566 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 MMP28Q9H239 520 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 EMC7Q9NPA0 242 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 TMEM100Q9NV29 134 aa12.28□□□□□ -0.44
HDAC6-224ENST00000481929 IQCF6A8MYZ5 107 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 LGALS8O00214 317 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 OR10H3O60404 316 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 ECDO95905 644 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-224ENST00000481929 OPN1SWP03999 348 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 HLA-DPB1P04440 258 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 VSIG10L2P0DP72 767 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 EEF1B2P24534 225 aaKnown RBP12.27□□□□□ -0.45
HDAC6-224ENST00000481929 GUCA2AQ02747 115 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 CD69Q07108 199 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 DUSP7Q16829 419 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 C11orf91Q3C1V1 193 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 SFRP4Q6FHJ7 346 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-224ENST00000481929 TSPYL5Q86VY4 417 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-224ENST00000481929 MSRB3Q8IXL7 192 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 CELF2-AS1Q8N7Q2 184 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 BOLLQ8N9W6 283 aaKnown RBP12.27□□□□□ -0.45
HDAC6-224ENST00000481929 GPR32P1Q8NGA4 272 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 PFN4Q8NHR9 129 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 ECSITQ9BQ95 431 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 PRSS27Q9BQR3 290 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 CNTD2Q9H8S5 307 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 TRIM36Q9NQ86 728 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 UFSP2Q9NUQ7 469 aa12.27□□□□□ -0.45
HDAC6-224ENST00000481929 NPFFO15130 113 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 NDUFA2O43678 99 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms