RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 ISG20L2Q9H9L3 353 aaKnown RBP8.89□□□□□ -0.99
USP39-215ENST00000481409 SLC17A5Q9NRA2 495 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 CENPMQ9NSP4 180 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 B3GNT2Q9NY97 397 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 SLCO1C1Q9NYB5 712 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 KLHDC2Q9Y2U9 406 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 MAP1BP46821 2468 aaKnown RBP8.89□□□□□ -0.99
USP39-215ENST00000481409 PIEZO2Q9H5I5 2752 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 FREM1Q5H8C1 2179 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 INTS1Q8N201 2190 aaKnown RBP8.88□□□□□ -0.99
USP39-215ENST00000481409 TRBV2A0A0J9YWF9 115 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 OR5H1A6NKK0 313 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 EIF4E1BA6NMX2 242 aaKnown RBP8.88□□□□□ -0.99
USP39-215ENST00000481409 GATBO75879 557 aaKnown RBP8.88□□□□□ -0.99
USP39-215ENST00000481409 SERPINA5P05154 406 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 ISG15P05161 165 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 PSKH1P11801 424 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 CBR1P16152 277 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 CD36P16671 472 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 CELP19835 753 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 BMP5P22003 454 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 TUBG1P23258 451 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 IL32P24001 234 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 CD79BP40259 229 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 PEX19P40855 299 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 RPS27P42677 84 aaKnown RBP8.88□□□□□ -0.99
USP39-215ENST00000481409 ASCL1P50553 236 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 TPTEP56180 551 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 RAB1AP62820 205 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 PSG4Q00888 419 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 MRPL49Q13405 166 aaKnown RBP8.88□□□□□ -0.99
USP39-215ENST00000481409 KRTAP27-1Q3LI81 207 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 YIF1BQ5BJH7 314 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 CD200R1LQ6Q8B3 271 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 CORO6Q6QEF8 472 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 ZNF474Q6S9Z5 364 aaPredicted RBP8.88□□□□□ -0.99
USP39-215ENST00000481409 ARL9Q6T311 187 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 LRRN1Q6UXK5 716 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 UNQ6126/PRO20091Q6UXV3 157 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 C3P1Q6ZMU1 363 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 ZNF704Q6ZNC4 412 aaPredicted RBP8.88□□□□□ -0.99
USP39-215ENST00000481409 SATL1Q86VE3 508 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 CXorf67Q86X51 503 aaPredicted RBP8.88□□□□□ -0.99
USP39-215ENST00000481409 ZNF808Q8N4W9 903 aaPredicted RBP8.88□□□□□ -0.99
USP39-215ENST00000481409 OR52H1Q8NGJ2 320 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 OR10S1Q8NGN2 331 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 OR2G2Q8NGZ5 317 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 OPN3Q9H1Y3 402 aaPredicted RBP8.88□□□□□ -0.99
USP39-215ENST00000481409 TUBG2Q9NRH3 451 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 ACOXLQ9NUZ1 547 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 ZNF224Q9NZL3 707 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 ST6GALNAC2Q9UJ37 374 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 SLC5A6Q9Y289 635 aa8.88□□□□□ -0.99
USP39-215ENST00000481409 BSNQ9UPA5 3926 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 NCOA6Q14686 2063 aaPredicted RBP8.87□□□□□ -0.99
USP39-215ENST00000481409 COL6A6A6NMZ7 2263 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 A0A0U1RQV5 110 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 TMEM269A0A1B0GVZ9 245 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 DPPA5A6NC42 116 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 EEF1E1-BLOC1S5C9J1V9 151 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 LOC110117498-PIK3R3F6TDL0 507 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 C16orf97H3BN30 126 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 EEF1E1O43324 174 aaKnown RBP8.87□□□□□ -0.99
USP39-215ENST00000481409 ICMTO60725 284 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 SRSF10O75494 262 aaKnown RBP8.87□□□□□ -0.99
USP39-215ENST00000481409 RAD51DO75771 328 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 GABARAPO95166 117 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 UBCP0CG48 685 aaKnown RBP8.87□□□□□ -0.99
USP39-215ENST00000481409 CD79AP11912 226 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 CRYGSP22914 178 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 MAPK3P27361 379 aaPredicted RBP8.87□□□□□ -0.99
USP39-215ENST00000481409 FGF9P31371 208 aaPredicted RBP8.87□□□□□ -0.99
USP39-215ENST00000481409 LIPAP38571 399 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 TLE1Q04724 770 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 DBPQ10586 325 aaPredicted RBP8.87□□□□□ -0.99
USP39-215ENST00000481409 TSTQ16762 297 aaKnown RBP8.87□□□□□ -0.99
USP39-215ENST00000481409 PABPC1L2AQ5JQF8 200 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 TMEM244Q5VVB8 128 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 XKRXQ6PP77 449 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 STAC2Q6ZMT1 411 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 CATSPERDQ86XM0 798 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 RFLNBQ8N5W9 214 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 OR5AK2Q8NH90 309 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 LILRB4Q8NHJ6 448 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 SMAP2Q8WU79 429 aaPredicted RBP8.87□□□□□ -0.99
USP39-215ENST00000481409 HSD17B8Q92506 261 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 MUCL1Q96DR8 90 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 C4orf45Q96LM5 186 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 AMELYQ99218 206 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 DOK1Q99704 481 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 FUNDC2Q9BWH2 189 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 WNT5BQ9H1J7 359 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 RGCCQ9H4X1 137 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 OPA3Q9H6K4 179 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 FAM206AQ9NX38 181 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 CRNNQ9UBG3 495 aaPredicted RBP8.87□□□□□ -0.99
USP39-215ENST00000481409 NUFIP1Q9UHK0 495 aaKnown RBP8.87□□□□□ -0.99
USP39-215ENST00000481409 ENPP5Q9UJA9 477 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 SH3BGRL2Q9UJC5 107 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 ERRFI1Q9UJM3 462 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms