RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 ULBP2Q9BZM5 246 aa12.88□□□□□ -0.35
PKNOX1-206ENST00000480179 HDHD2Q9H0R4 259 aa12.88□□□□□ -0.35
PKNOX1-206ENST00000480179 C11orf54Q9H0W9 315 aaPredicted RBP12.88□□□□□ -0.35
PKNOX1-206ENST00000480179 LIN7BQ9HAP6 207 aa12.88□□□□□ -0.35
PKNOX1-206ENST00000480179 FAM206AQ9NX38 181 aa12.88□□□□□ -0.35
PKNOX1-206ENST00000480179 SPATA2Q9UM82 520 aa12.88□□□□□ -0.35
PKNOX1-206ENST00000480179 OR5H15A6NDH6 313 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 ZNF878C9JN71 531 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 NKX2-8O15522 239 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 NME2P1O60361 137 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 HPNP05981 417 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 HNRNPCP07910 306 aaKnown RBP eCLIP12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 LIPCP11150 499 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 NME2P22392 152 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 HSD11B1P28845 292 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 INPP1P49441 399 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 SRYQ05066 204 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 RNASE12Q5GAN4 147 aaKnown RBP12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 C10orf128Q5T292 105 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 ABLIM2Q6H8Q1 611 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 ZNF704Q6ZNC4 412 aaPredicted RBP12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 ASB18Q6ZVZ8 466 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 IZUMO1Q8IYV9 350 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 UBE2J2Q8N2K1 259 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 MDS2Q8NDY4 140 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 AGAP4Q96P64 663 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 WACQ9BTA9 647 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 ZNF416Q9BWM5 594 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 RBM24Q9BX46 236 aaKnown RBP12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 SLC22A4Q9H015 551 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.87□□□□□ -0.352e-10■■■■■ 29
PKNOX1-206ENST00000480179 ETAA1Q9NY74 926 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 TAS2R4Q9NYW5 299 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 HHLA2Q9UM44 414 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 KLF13Q9Y2Y9 288 aaPredicted RBP12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 PCDHGA9Q9Y5G4 932 aaKnown RBP12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 N6AMT1Q9Y5N5 214 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 FLVCR1Q9Y5Y0 555 aa12.87□□□□□ -0.35
PKNOX1-206ENST00000480179 ZNF716A6NP11 495 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 BOLA2-SMG1P6H3BVE0 249 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 RER1O15258 196 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 LMX1BO60663 402 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 HLA-DQB1P01920 261 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 CD2P06729 351 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 SP1P08047 785 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 UBCP0CG48 685 aaKnown RBP12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 MSR1P21757 451 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 GUCA1AP43080 201 aaPredicted RBP12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 RRADP55042 308 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 CXADRP78310 365 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 PDSS1Q5T2R2 415 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 SLC25A25Q6KCM7 469 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 FCRLAQ7L513 359 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 C20orf196Q8IYI0 205 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 CMTM4Q8IZR5 234 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 TMEM251Q8N6I4 163 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 ASB5Q8WWX0 329 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 PBOV1Q9GZY1 135 aa12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 FOXD3Q9UJU5 478 aaPredicted RBP12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 MRPS7Q9Y2R9 242 aaKnown RBP12.86□□□□□ -0.35
PKNOX1-206ENST00000480179 PLA2G10O15496 165 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 DHHO43323 396 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 EEF1E1O43324 174 aaKnown RBP12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 PRB1P04280 392 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 ZNF84P51523 738 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 PRKXP51817 358 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 PSMA6P60900 246 aaKnown RBP12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 ZNF57Q68EA5 555 aaPredicted RBP12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 ASPHD2Q6ICH7 369 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 PYHIN1Q6K0P9 492 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 SPACA3Q8IXA5 215 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 SLC25A38Q96DW6 304 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 KCNJ15Q99712 375 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 CKLFQ9UBR5 152 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 OR5V1Q9UGF6 321 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 LINC01387J3KSC0 135 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 ACSM4P0C7M7 580 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 SLC2A1P11166 492 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 CD46P15529 392 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 RANBP1P43487 201 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 LHX2P50458 406 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 MMP16P51512 607 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 ZNF133P52736 654 aaPredicted RBP12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 UCNP55089 124 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 ARG2P78540 354 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 ENDOGQ14249 297 aaKnown RBP12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 CARTPTQ16568 116 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 TMEM244Q5VVB8 128 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 FOXL2NBQ6ZUU3 175 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 AAED1Q7RTV5 226 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 LRRC18Q8N456 261 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 ABHD3Q8WU67 409 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 CPNE4Q96A23 557 aaPredicted RBP12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 RFT1Q96AA3 541 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 NABP1Q96AH0 204 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 ZFP3Q96NJ6 502 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 ABHD1Q96SE0 405 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 NKX3-1Q99801 234 aaPredicted RBP12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 NELFAQ9H3P2 528 aa12.85□□□□□ -0.35
PKNOX1-206ENST00000480179 PNRC2Q9NPJ4 139 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms