RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 PPIAL4AQ9Y536 164 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 NPTNQ9Y639 398 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 AUP1Q9Y679 476 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 A0A087WUU8 490 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 F5H5K5 113 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 IFNL4K9M1U5 179 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 AHCYL1O43865 530 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 DEAF1O75398 565 aaPredicted RBP5.99□□□□□ -1.45
COL17A1-205ENST00000480127 SASH3O75995 380 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 DIRAS1O95057 198 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 PRSS23O95084 383 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 ZNF205O95201 554 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 PPP1R3DO95685 299 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 FSHBP01225 129 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 LCATP04180 440 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 CRYBA1P05813 215 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 COX5BP10606 129 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 CTLA4P16410 223 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 RHCEP18577 417 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 RRM2P31350 389 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 GGT2P36268 569 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 MDH1P40925 334 aaKnown RBP5.99□□□□□ -1.45
COL17A1-205ENST00000480127 MDH2P40926 338 aaKnown RBP5.99□□□□□ -1.45
COL17A1-205ENST00000480127 MMP15P51511 669 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 CRYBA2P53672 197 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 GNB2P62879 340 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 PSG7Q13046 419 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 BAMBIQ13145 260 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 HLXQ14774 488 aaPredicted RBP5.99□□□□□ -1.45
COL17A1-205ENST00000480127 TUSC1Q2TAM9 212 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 MIDNQ504T8 468 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 MESTQ5EB52 335 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 OTPQ5XKR4 325 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 GLYATQ6IB77 296 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 OR2T2Q6IF00 324 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 DPY19L2P2Q6ZN68 376 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 TMPRSS11FQ6ZWK6 438 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 CBLL1Q75N03 491 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 SLC15A3Q8IY34 581 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 PROKR2Q8NFJ6 384 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 OR8B3Q8NGG8 313 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 OR4C15Q8NGM1 316 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 OR13G1Q8NGZ3 307 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 SLC7A6Q92536 515 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 DVL3Q92997 716 aaPredicted RBP5.99□□□□□ -1.45
COL17A1-205ENST00000480127 PTP4A1Q93096 173 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 SPTSSAQ969W0 71 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 ZDHHC16Q969W1 377 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 OTULINQ96BN8 352 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 SAMD8Q96LT4 415 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 NSMCE2Q96MF7 247 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 DUX5Q96PT3 197 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 OR2V2Q96R30 315 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 OR8B2Q96RD0 313 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 SEPHS2Q99611 448 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 GPA33Q99795 319 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 HDHD2Q9H0R4 259 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 ANKRD19PQ9H560 264 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 WDR76Q9H967 626 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 RPRD1BQ9NQG5 326 aaKnown RBP5.99□□□□□ -1.45
COL17A1-205ENST00000480127 TBCCD1Q9NVR7 557 aa5.99□□□□□ -1.45
COL17A1-205ENST00000480127 NOP16Q9Y3C1 178 aaKnown RBP5.99□□□□□ -1.45
COL17A1-205ENST00000480127 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.98□□□□□ -1.45
COL17A1-205ENST00000480127 hCG_1807616A0A1W2PRN6 198 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 A0A1W2PRQ8 180 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 GGT3PA6NGU5 568 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 A6NLC8 198 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 NME4O00746 187 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 CDC42EP2O14613 210 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 RER1O15258 196 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 UBOX5O94941 541 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 FABP3P05413 133 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 RAC2P15153 192 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 FPR3P25089 353 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 MTNR1AP48039 350 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 TPTEP56180 551 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 LSM6P62312 80 aaKnown RBP5.98□□□□□ -1.45
COL17A1-205ENST00000480127 ECH1Q13011 328 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 DGCR6Q14129 220 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 ENDOGQ14249 297 aaKnown RBP5.98□□□□□ -1.45
COL17A1-205ENST00000480127 OR8G1Q15617 311 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 OR8B8Q15620 311 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 KCNJ8Q15842 424 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 MEP1BQ16820 701 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 CLEC12AQ5QGZ9 265 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 SLC35F1Q5T1Q4 408 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 CORO6Q6QEF8 472 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 PGAP1Q75T13 922 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 MOGAT3Q86VF5 341 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 LINC00346Q8IVM7 164 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 DEFB108BQ8NET1 73 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 OR52E2Q8NGJ4 325 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 OR4K13Q8NH42 304 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 SLC7A13Q8TCU3 470 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 SLC25A28Q96A46 364 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 TECTBQ96PL2 329 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 COPS4Q9BT78 406 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 SSBP3Q9BWW4 388 aaPredicted RBP5.98□□□□□ -1.45
COL17A1-205ENST00000480127 C1QTNF5Q9BXJ0 243 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 NUAK2Q9H093 628 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms