RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 ADGRG4Q8IZF6 3080 aa10.9□□□□□ -0.67
TRAPPC12-218ENST00000479897 SPTAN1Q13813 2472 aaKnown RBP10.9□□□□□ -0.67
TRAPPC12-218ENST00000479897 IGHV1-18A0A0C4DH31 117 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 METTL15A6NJ78 407 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 TRIM64CA6NLI5 447 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 J3QW42 95 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 GOSR1O95249 250 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 APOC1P02654 83 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 KRT8P05787 483 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 CECR9P0C854 216 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 EEF1B2P24534 225 aaKnown RBP10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 HTR5AP47898 357 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 ETV1P50549 477 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 IDH3GP51553 393 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 MRPL28Q13084 256 aaKnown RBP10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 TMEM154Q6P9G4 183 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 ZNF773Q6PK81 442 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 LRRN1Q6UXK5 716 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 FAM220AQ7Z4H9 259 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 KRT77Q7Z794 578 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 LHFPL3Q86UP9 236 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 MYPOPQ86VE0 399 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 KLHL36Q8N4N3 616 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 ZNF485Q8NCK3 441 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 CPEB3Q8NE35 698 aaKnown RBP10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 SLC30A7Q8NEW0 376 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 IL17RDQ8NFM7 739 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 SNX33Q8WV41 574 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 SPTSSAQ969W0 71 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 POM121L2Q96KW2 1035 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 KCNJ15Q99712 375 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 CHCHD3Q9NX63 227 aaKnown RBP10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 SLCO1C1Q9NYB5 712 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 ERVK-18Q9QC07 812 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 LRP12Q9Y561 859 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 RTTNQ86VV8 2226 aa10.89□□□□□ -0.67
TRAPPC12-218ENST00000479897 LOC100509620A0A075B734 347 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 C19orf84I3L1E1 186 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 M0R135 149 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 MYL12BO14950 172 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 SRSF10O75494 262 aaKnown RBP10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 CELA3BP08861 270 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 H2BFMP0C1H6 154 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 PTAFRP25105 342 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 STOMP27105 288 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 APEX1P27695 318 aaKnown RBP10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 APLNRP35414 380 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 RIDAP52758 137 aaKnown RBP10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 PSMA6P60900 246 aaKnown RBP10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 TBC1D28Q2M2D7 210 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 RSPO1Q2MKA7 263 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 TMEM108Q6UXF1 575 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 TMPRSS11AQ6ZMR5 421 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 SVOPQ8N4V2 548 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 NANOGP1Q8N7R0 232 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 OR1J2Q8NGS2 313 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 FAM222BQ8WU58 562 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 ZNF799Q96GE5 643 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 MS4A3Q96HJ5 214 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 DOK1Q99704 481 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 MND1Q9BWT6 205 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 TTTY10Q9BZA0 68 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 MOB1AQ9H8S9 216 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 ELOVL3Q9HB03 270 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 CENPMQ9NSP4 180 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 IKZF2Q9UKS7 526 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 ERGIC3Q9Y282 383 aa10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 LSM2Q9Y333 95 aaKnown RBP10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 HEATR1Q9H583 2144 aaKnown RBP10.88□□□□□ -0.67
TRAPPC12-218ENST00000479897 CADP27708 2225 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 IGHV2OR16-5A0A0B4J2B6 119 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 ACOD1A6NK06 481 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 MT-ND5P03915 603 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 TACSTD2P09758 323 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 ACSM4P0C7M7 580 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 ZNF35P13682 527 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 HSD11B1P28845 292 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 PCSK6P29122 969 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 RGS6P49758 472 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 GDI2P50395 445 aaKnown RBP10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 MMP16P51512 607 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 ZNF83P51522 516 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 TPTEP56180 551 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 WNT4P56705 351 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 OR12D2P58182 307 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 NAAAQ02083 359 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 BDH1Q02338 343 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 HGFACQ04756 655 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 ACSM1Q08AH1 577 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 ZNF829Q3KNS6 432 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 TP53I3Q53FA7 332 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 BEX5Q5H9J7 111 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 FDX2Q6P4F2 183 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 DRAM2Q6UX65 266 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 COLCA1Q6ZS62 124 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 WFDC8Q8IUA0 241 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 SPARTQ8N0X7 666 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 TSPAN14Q8NG11 270 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 LINC01560Q8TB33 94 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms