RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 CAPN7Q9Y6W3 813 aa11.12□□□□□ -0.63
VCL-205ENST00000478896 IGHV3-64DA0A0J9YX35 117 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 OR6C6A6NF89 314 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 CXCR6O00574 342 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 SOCS2O14508 198 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 FFAR1O14842 300 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 RER1O15258 196 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 NDUFB2O95178 105 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 DBHP09172 617 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 IGHV4-38-2P0DP08 117 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 SDHAP31040 664 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 LSM6P62312 80 aaKnown RBP11.11□□□□□ -0.63
VCL-205ENST00000478896 CCDC92Q53HC0 331 aaPredicted RBP11.11□□□□□ -0.63
VCL-205ENST00000478896 LEG1Q6P5S2 330 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 SPATC1Q76KD6 591 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 NLRC3Q7RTR2 1065 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.11□□□□□ -0.63
VCL-205ENST00000478896 KLBQ86Z14 1044 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 GLB1L2Q8IW92 636 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 C1orf87Q8N0U7 546 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 FAM156AQ8NDB6 213 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 BHLHE23Q8NDY6 225 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 OR8G5Q8NG78 346 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 OR8B3Q8NGG8 313 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 OR13G1Q8NGZ3 307 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 APOBEC3DQ96AK3 386 aaPredicted RBP11.11□□□□□ -0.63
VCL-205ENST00000478896 RCN3Q96D15 328 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 ZNF582Q96NG8 517 aaPredicted RBP11.11□□□□□ -0.63
VCL-205ENST00000478896 OR8B2Q96RD0 313 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 NMNAT1Q9HAN9 279 aaPredicted RBP11.11□□□□□ -0.63
VCL-205ENST00000478896 FGFR1OP2Q9NVK5 253 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 ARGLU1Q9NWB6 273 aaPredicted RBP11.11□□□□□ -0.63
VCL-205ENST00000478896 MIOXQ9UGB7 285 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 DOCK11Q5JSL3 2073 aa11.11□□□□□ -0.63
VCL-205ENST00000478896 IGHV2-70DA0A0C4DH43 119 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 LRRC30A6NM36 301 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 CLDN34H7C241 214 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 SERPINA1P01009 418 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 WNT2P09544 360 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 IRF2P14316 349 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 CD80P33681 288 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 LIPEQ05469 1076 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 PAX8Q06710 450 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 SLC9A3R2Q15599 337 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 TUSC1Q2TAM9 212 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 FGD3Q5JSP0 725 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 GPR139Q6DWJ6 353 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 DNM1P34Q6PK57 102 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 FBXW12Q6X9E4 464 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 TMPRSS11FQ6ZWK6 438 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 CBLL1Q75N03 491 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 MOGAT3Q86VF5 341 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 POU5F2Q8N7G0 328 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 FAM162AQ96A26 154 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 NEIL1Q96FI4 390 aaPredicted RBP11.1□□□□□ -0.63
VCL-205ENST00000478896 HDHD2Q9H0R4 259 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 ANKRD19PQ9H560 264 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 VIPAS39Q9H9C1 493 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 KRCC1Q9NPI7 259 aaPredicted RBP11.1□□□□□ -0.63
VCL-205ENST00000478896 CMTM6Q9NX76 183 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 GMPR2Q9P2T1 348 aaKnown RBP11.1□□□□□ -0.63
VCL-205ENST00000478896 ATPIF1Q9UII2 106 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 AURKCQ9UQB9 309 aa11.1□□□□□ -0.63
VCL-205ENST00000478896 MDFIC2A0A1B0GVS7 189 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 F5H5P2 479 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 H0YL77 283 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 IMPA2O14732 288 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 PPIAL4GP0DN37 164 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 ZNF26P17031 533 aaPredicted RBP11.09□□□□□ -0.63
VCL-205ENST00000478896 CPT2P23786 658 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 RPS6KA3P51812 740 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 PGM2L1Q6PCE3 622 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 TREML4Q6UXN2 200 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 ADCK1Q86TW2 530 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 GJC3Q8NFK1 279 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 SLC7A13Q8TCU3 470 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 RAB40AQ8WXH6 277 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 TAF15Q92804 592 aaKnown RBP eCLIP11.09□□□□□ -0.63
VCL-205ENST00000478896 ZDHHC16Q969W1 377 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 UPRTQ96BW1 309 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 RSRC1Q96IZ7 334 aaKnown RBP11.09□□□□□ -0.63
VCL-205ENST00000478896 TMEM246Q9BRR3 403 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 HCAR1Q9BXC0 346 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 NUAK2Q9H093 628 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 WDR76Q9H967 626 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 TMEM165Q9HC07 324 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 NRIP3Q9NQ35 241 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 VSX1Q9NZR4 365 aaPredicted RBP11.09□□□□□ -0.63
VCL-205ENST00000478896 ARMCX1Q9P291 453 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 RPS6KA6Q9UK32 745 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 SIGLEC7Q9Y286 467 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 FAM32AQ9Y421 112 aaKnown RBP11.09□□□□□ -0.63
VCL-205ENST00000478896 IER3IP1Q9Y5U9 82 aa11.09□□□□□ -0.63
VCL-205ENST00000478896 POM121CA8CG34 1229 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 IQCF6A8MYZ5 107 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 MLNRO43193 412 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 PLATP00750 562 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 H1F0P07305 194 aaKnown RBP11.08□□□□□ -0.64
VCL-205ENST00000478896 SELEP16581 610 aa11.08□□□□□ -0.64
VCL-205ENST00000478896 MDKP21741 143 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms