RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 CD79AP11912 226 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 ZNF823P16415 610 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 NPR2P20594 1047 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 LAP3P28838 519 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 BLVRAP53004 296 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 FOXG1P55316 489 aaPredicted RBP12.5□□□□□ -0.41
USP11-207ENST00000478596 DBPQ10586 325 aaPredicted RBP12.5□□□□□ -0.41
USP11-207ENST00000478596 MEDAGQ5VYS4 303 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 NXNL2Q5VZ03 156 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 OR7E24Q6IFN5 339 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 ANKRD16Q6P6B7 361 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 LRFN4Q6PJG9 635 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 SLC25A47Q6Q0C1 308 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 SLC16A14Q7RTX9 510 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 BCDIN3DQ7Z5W3 292 aaKnown RBP12.5□□□□□ -0.41
USP11-207ENST00000478596 ERI1Q8IV48 349 aaKnown RBP12.5□□□□□ -0.41
USP11-207ENST00000478596 OR6V1Q8N148 313 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 PIAS4Q8N2W9 510 aaPredicted RBP12.5□□□□□ -0.41
USP11-207ENST00000478596 LRRC18Q8N456 261 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 ZNF433Q8N7K0 673 aaPredicted RBP12.5□□□□□ -0.41
USP11-207ENST00000478596 C1orf162Q8NEQ5 155 aaPredicted RBP12.5□□□□□ -0.41
USP11-207ENST00000478596 OR6N2Q8NGY6 317 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 CNIH3Q8TBE1 160 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 TRUB1Q8WWH5 349 aaKnown RBP12.5□□□□□ -0.41
USP11-207ENST00000478596 TFAP2CQ92754 450 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 MRPL24Q96A35 216 aaKnown RBP12.5□□□□□ -0.41
USP11-207ENST00000478596 MUCL1Q96DR8 90 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 ZNF837Q96EG3 531 aaPredicted RBP12.5□□□□□ -0.41
USP11-207ENST00000478596 JMJD8Q96S16 334 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 CDADC1Q9BWV3 514 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 HCAR1Q9BXC0 346 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 BPESC1Q9GZL8 116 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 NELFAQ9H3P2 528 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 RNF121Q9H920 327 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 EMC7Q9NPA0 242 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 TMEM38BQ9NVV0 291 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 POU2F3Q9UKI9 436 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 IGLV1-36A0A0B4J1U3 117 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 DCTN6O00399 190 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 GLCEO94923 617 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 GPANK1O95872 356 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 SPARCP09486 303 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 OR8G3PP0DMU2 310 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 GSTT1P30711 240 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 NAA10P41227 235 aaPredicted RBP12.49□□□□□ -0.41
USP11-207ENST00000478596 DVL1P1P54792 670 aaPredicted RBP12.49□□□□□ -0.41
USP11-207ENST00000478596 SNRPGP62308 76 aaKnown RBP12.49□□□□□ -0.41
USP11-207ENST00000478596 MAD2L1BPQ15013 274 aaPredicted RBP12.49□□□□□ -0.41
USP11-207ENST00000478596 HIKESHIQ53FT3 197 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 SLC35D3Q5M8T2 416 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 SLC22A25Q6T423 547 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 TMEM108Q6UXF1 575 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 B3GLCTQ6Y288 498 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 THAP5Q7Z6K1 395 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 SLC22A24Q8N4F4 322 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 NMD3Q96D46 503 aaKnown RBP12.49□□□□□ -0.41
USP11-207ENST00000478596 ZNF582Q96NG8 517 aaPredicted RBP12.49□□□□□ -0.41
USP11-207ENST00000478596 INTS14Q96SY0 518 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 CNN2Q99439 309 aaKnown RBP12.49□□□□□ -0.41
USP11-207ENST00000478596 ANKRD60Q9BZ19 345 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 POLE4Q9NR33 117 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.49□□□□□ -0.41
USP11-207ENST00000478596 MOKQ9UQ07 419 aa12.49□□□□□ -0.41
USP11-207ENST00000478596 CMYA5Q8N3K9 4069 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 A0A1W2PR80 420 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 LRP5LA4QPB2 252 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 C12orf71A8MTZ7 269 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 FAM20BO75063 409 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 ENTPD6O75354 484 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 RAB36O95755 333 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 WNT11O96014 354 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 CDH15P55291 814 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 TUBA1BP68363 451 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 TUBA4AP68366 448 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 MRPS34P82930 218 aaKnown RBP12.48□□□□□ -0.41
USP11-207ENST00000478596 HSF2Q03933 536 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 MEP1BQ16820 701 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 TBRG1Q3YBR2 411 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 SLC36A2Q495M3 483 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 TIMM23BQ5SRD1 257 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 OTPQ5XKR4 325 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 TMEM53Q6P2H8 277 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 TUBA1AQ71U36 451 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 MEPCEQ7L2J0 689 aaKnown RBP12.48□□□□□ -0.41
USP11-207ENST00000478596 ZBTB46Q86UZ6 589 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 P2RY8Q86VZ1 359 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 C17orf78Q8N4C9 275 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 OR51G2Q8NGK0 314 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 OR2AJ1Q8NGZ0 328 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 OR52N5Q8NH56 324 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 UBE2FQ969M7 185 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 SH3GL3Q99963 347 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 NMNAT2Q9BZQ4 307 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 AASSQ9UDR5 926 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 WARS2Q9UGM6 360 aaKnown RBP12.48□□□□□ -0.41
USP11-207ENST00000478596 AMDHD2Q9Y303 409 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 UGT2A1Q9Y4X1 527 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 COMMD3-BMI1R4GMX3 469 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 HSPE1-MOB4S4R3N1 261 aa12.48□□□□□ -0.41
USP11-207ENST00000478596 RGS9O75916 674 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms