RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 GDI2P50395 445 aaKnown RBP13.28□□□□□ -0.28
SEC13-215ENST00000477547 HCCSP53701 268 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 ACTC1P68032 377 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 ACTA1P68133 377 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 DAZAP2Q15038 168 aaPredicted RBP13.28□□□□□ -0.28
SEC13-215ENST00000477547 TESK1Q15569 626 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 LAIR2Q6ISS4 152 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 KBTBD8Q8NFY9 601 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 THEM6Q8WUY1 208 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 LGALS12Q96DT0 336 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 HS3ST6Q96QI5 342 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 MNTQ99583 582 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 RHNO1Q9BSD3 238 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 DDX28Q9NUL7 540 aaKnown RBP13.28□□□□□ -0.28
SEC13-215ENST00000477547 RNF115Q9Y4L5 304 aa13.28□□□□□ -0.28
SEC13-215ENST00000477547 NAV3Q8IVL0 2385 aa13.27□□□□□ -0.28
SEC13-215ENST00000477547 IRGMA1A4Y4 181 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 C5orf49A4QMS7 147 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 SLC1A7O00341 560 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 XPNPEP2O43895 674 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 ALOX5APP20292 161 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 CCNOP22674 350 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 LOXP28300 417 aaPredicted RBP13.27□□□□□ -0.29
SEC13-215ENST00000477547 CALCRP30988 508 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 CXCR4P61073 352 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 RAB40BQ12829 278 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 TAF13Q15543 124 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 SLC22A25Q6T423 547 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 PAQR4Q8N4S7 273 aaPredicted RBP13.27□□□□□ -0.29
SEC13-215ENST00000477547 BPIFB6Q8NFQ5 453 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 OR1J2Q8NGS2 313 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 RNF133Q8WVZ7 376 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 SLC7A6Q92536 515 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 RADILQ96JH8 1075 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 POM121L2Q96KW2 1035 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 CENPMQ9NSP4 180 aa13.27□□□□□ -0.29
SEC13-215ENST00000477547 LOC100509620A0A075B734 347 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 FADS2O95864 444 aaKnown RBP13.26□□□□□ -0.29
SEC13-215ENST00000477547 DBHP09172 617 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 OR2T7P0C7T2 308 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 HSD11B1P28845 292 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 KRTAP10-9P60411 292 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 GALK2Q01415 458 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 ECH1Q13011 328 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 C6orf141Q5SZD1 244 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 KCTD18Q6PI47 426 aaPredicted RBP13.26□□□□□ -0.29
SEC13-215ENST00000477547 ZNF322Q6U7Q0 402 aaPredicted RBP13.26□□□□□ -0.29
SEC13-215ENST00000477547 LRRN1Q6UXK5 716 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 AHSA2Q719I0 299 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 SSX6Q7RTT6 188 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 IL17RDQ8NFM7 739 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 OR52I1Q8NGK6 324 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 OR2T27Q8NH04 317 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 ASB17Q8WXJ9 295 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 POU2F3Q9UKI9 436 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 IKZF2Q9UKS7 526 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 EXOGQ9Y2C4 368 aaKnown RBP13.26□□□□□ -0.29
SEC13-215ENST00000477547 PCDHGB1Q9Y5G3 927 aa13.26□□□□□ -0.29
SEC13-215ENST00000477547 A0A1W2PQL4 384 aaPredicted RBP13.25□□□□□ -0.29
SEC13-215ENST00000477547 EFCAB10A6NFE3 127 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 PRR32B1ATL7 298 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 M0R135 149 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 PSMD9O00233 223 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 DENRO43583 198 aaKnown RBP13.25□□□□□ -0.29
SEC13-215ENST00000477547 ABHD16AO95870 558 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 IGHA1P01876 353 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 ROS1P08922 2347 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 H2BFMP0C1H6 154 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 OPRL1P41146 370 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 SLC15A1P46059 708 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 GRB2P62993 217 aaKnown RBP13.25□□□□□ -0.29
SEC13-215ENST00000477547 SNTB2Q13425 540 aaKnown RBP13.25□□□□□ -0.29
SEC13-215ENST00000477547 KLHL22Q53GT1 634 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 ZNF704Q6ZNC4 412 aaPredicted RBP13.25□□□□□ -0.29
SEC13-215ENST00000477547 KRT77Q7Z794 578 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 TMEM200AQ86VY9 491 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 ZNF295-AS1Q8N0V1 137 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 ZNF786Q8N393 782 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 ACBD7Q8N6N7 88 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 SPTSSAQ969W0 71 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 ZNF799Q96GE5 643 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 OR8B4Q96RC9 309 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 TMEM204Q9BSN7 226 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 OR51B6Q9H340 312 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 MRPS18AQ9NVS2 196 aaKnown RBP13.25□□□□□ -0.29
SEC13-215ENST00000477547 MYRFQ9Y2G1 1151 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 LRP12Q9Y561 859 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 PCDHGB5Q9Y5G0 923 aa13.25□□□□□ -0.29
SEC13-215ENST00000477547 DAPL1A0PJW8 107 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 SHISA9B4DS77 424 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 J3QRE1 110 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 PLAUP00749 431 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 FAM157BP0CG42 384 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 PIPP12273 146 aaPredicted RBP13.24□□□□□ -0.29
SEC13-215ENST00000477547 ZNF35P13682 527 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 SLC6A9P48067 706 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 ZNF85Q03923 595 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 HGFACQ04756 655 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 MED21Q13503 144 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 SPNS3Q6ZMD2 512 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms