RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PPP1CBP62140 327 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 TNFAIP6P98066 277 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-214ENST00000477152 SCRN3Q0VDG4 424 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 TMEM155Q4W5P6 130 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 ESCO2Q56NI9 601 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 ALG10Q5BKT4 473 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 MTX3Q5HYI7 312 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 BTNL3Q6UXE8 466 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 DLEU7Q6UYE1 221 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 RRM2BQ7LG56 351 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 CARM1Q86X55 608 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 OR5L1Q8NGL2 311 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 OR10A6Q8NH74 314 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 KLF14Q8TD94 323 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-214ENST00000477152 SLC25A28Q96A46 364 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 THOC1Q96FV9 657 aaKnown RBP6.15□□□□□ -1.43
BRCA1-214ENST00000477152 PLEKHA8Q96JA3 519 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 SEPHS2Q99611 448 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 ZNF747Q9BV97 191 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 C1orf43Q9BWL3 253 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 KAT8Q9H7Z6 458 aaKnown RBP6.15□□□□□ -1.43
BRCA1-214ENST00000477152 GID8Q9NWU2 228 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 KIF17Q9P2E2 1029 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 IL20RAQ9UHF4 553 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 NUP50Q9UKX7 468 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 SH3GLB1Q9Y371 365 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 AUP1Q9Y679 476 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 TANC2Q9HCD6 1990 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 XKRYO14609 159 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 ZNF500O60304 480 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-214ENST00000477152 ABHD16AO95870 558 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 IGHV1-46P01743 117 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 MMP7P09237 267 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-214ENST00000477152 SBK2P0C263 348 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 HKR1P10072 659 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 ZNF32P17041 273 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 MSR1P21757 451 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 SLC9A3P48764 834 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 MTPNP58546 118 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 RPL27P61353 136 aaKnown RBP6.14□□□□□ -1.43
BRCA1-214ENST00000477152 GLO1Q04760 184 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 AWAT1Q58HT5 328 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 PTOV1Q86YD1 416 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 LRRC17Q8N6Y2 441 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 PCYOX1LQ8NBM8 494 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 OR8J3Q8NGG0 315 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 FGFBP3Q8TAT2 258 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 SLC25A40Q8TBP6 338 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 NSMAFQ92636 917 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 MARS2Q96GW9 593 aaKnown RBP6.14□□□□□ -1.43
BRCA1-214ENST00000477152 POM121L2Q96KW2 1035 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 C4orf45Q96LM5 186 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 SAMD8Q96LT4 415 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 SLC6A7Q99884 636 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 EBF4Q9BQW3 602 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 MS4A7Q9GZW8 240 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-214ENST00000477152 ZNF696Q9H7X3 374 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 KRCC1Q9NPI7 259 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-214ENST00000477152 INTS9Q9NV88 658 aaKnown RBP6.14□□□□□ -1.43
BRCA1-214ENST00000477152 PLEK2Q9NYT0 353 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 SLC23A1Q9UHI7 598 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 TAGLN3Q9UI15 199 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 RIMS3Q9UJD0 308 aa6.14□□□□□ -1.43
BRCA1-214ENST00000477152 A0A1W2PPL8 197 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 LRRC30A6NM36 301 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 BBIP1A8MTZ0 92 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 WNT9BO14905 357 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 IGHMP01871 453 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 AQP2P41181 271 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 RGS6P49758 472 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 ERVS71-1P61550 626 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 UBA52P62987 128 aaKnown RBP6.13□□□□□ -1.43
BRCA1-214ENST00000477152 LCN2P80188 198 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 BAMBIQ13145 260 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 COQ5Q5HYK3 327 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 LRRN1Q6UXK5 716 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 COMTD1Q86VU5 262 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 WDFY1Q8IWB7 410 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 RNF113BQ8IZP6 322 aaKnown RBP6.13□□□□□ -1.43
BRCA1-214ENST00000477152 C1orf87Q8N0U7 546 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 PAQR4Q8N4S7 273 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-214ENST00000477152 GPR32P1Q8NGA4 272 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 ATP6V1G3Q96LB4 118 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 DCLRE1CQ96SD1 692 aaKnown RBP6.13□□□□□ -1.43
BRCA1-214ENST00000477152 OR2H1Q9GZK4 316 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 OR2J1Q9GZK6 312 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 IKZF5Q9H5V7 419 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 TBCCD1Q9NVR7 557 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 GRHPRQ9UBQ7 328 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 IL19Q9UHD0 177 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 LRCH1Q9Y2L9 728 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 NOP16Q9Y3C1 178 aaKnown RBP6.13□□□□□ -1.43
BRCA1-214ENST00000477152 A0A1B0GUS0 222 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 UBE2QL1A1L167 161 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 HMGB1P1B2RPK0 211 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-214ENST00000477152 PPIAL4GP0DN37 164 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 IFI30P13284 250 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 IRF2P14316 349 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 GYPEP15421 78 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 SELEP16581 610 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms