RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 POU4F2Q12837 409 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 MOGAT2Q3SYC2 334 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 C4orf17Q53FE4 359 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 UBE2NLQ5JXB2 153 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 LAMTOR1Q6IAA8 161 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 KCTD18Q6PI47 426 aaPredicted RBP4.5□□□□□ -1.69
CCDC39-204ENST00000476379 BAIAP2L2Q6UXY1 529 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 ADAMTSL4Q6UY14 1074 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF574Q6ZN55 896 aaPredicted RBP4.5□□□□□ -1.69
CCDC39-204ENST00000476379 STX12Q86Y82 276 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 OR2G2Q8NGZ5 317 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 OR2T27Q8NH04 317 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 ST7LQ8TDW4 575 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 GAREM1Q9H706 876 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 CUTCQ9NTM9 273 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 GPR160Q9UJ42 338 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 KCND3Q9UK17 655 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 NXT1Q9UKK6 140 aaKnown RBP4.5□□□□□ -1.69
CCDC39-204ENST00000476379 MMP17Q9ULZ9 603 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 PCDHGA9Q9Y5G4 932 aaKnown RBP4.5□□□□□ -1.69
CCDC39-204ENST00000476379 HELZP42694 1942 aaKnown RBP4.5□□□□□ -1.69
CCDC39-204ENST00000476379 SPAARA0A1B0GVQ0 90 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 PRR32B1ATL7 298 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 NPIPB8E9PQR5 432 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 RER1O15258 196 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 MED6O75586 246 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 IGHV3-13P01766 116 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 IGHV3-7P01780 117 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 LCATP04180 440 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 GAAP10253 952 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF14P17017 642 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-204ENST00000476379 CD53P19397 219 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 CXCL2P19875 107 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 CD80P33681 288 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 RORAP35398 523 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF41P51814 821 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-204ENST00000476379 DLX5P56178 289 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 GLO1Q04760 184 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 SMCO1Q147U7 214 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 TAF9Q16594 264 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 ARHGAP11BQ3KRB8 267 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 OR2B11Q5JQS5 317 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 ADAM5Q6NVV9 412 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 ATRAIDQ6UW56 229 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 CREB3L2Q70SY1 520 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF679Q8IYX0 411 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 OR5AS1Q8N127 324 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 SLC22A18ASQ8N1D0 253 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 SLC26A10Q8NG04 563 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 MFSD8Q8NHS3 518 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 SGK3Q96BR1 496 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 SIGLEC11Q96RL6 698 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 MARVELD1Q9BSK0 173 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 RSRP1Q9BUV0 290 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF442Q9H7R0 627 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 WASH6PQ9NQA3 447 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 FGF21Q9NSA1 209 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 EMC3Q9P0I2 261 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 FRRS1LQ9P0K9 344 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF223Q9UK11 482 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-204ENST00000476379 RCL1Q9Y2P8 373 aaKnown RBP4.49□□□□□ -1.69
CCDC39-204ENST00000476379 TMED7Q9Y3B3 224 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 TMED7-TICAM2A0A0A6YYA0 188 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 TRAV39A0A0B4J263 110 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 TTLL8A6PVC2 850 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 BHLHE40O14503 412 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 WISP1O95388 367 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 IL33O95760 270 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 WNT11O96014 354 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 ERCC1P07992 297 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-204ENST00000476379 POU2F2P09086 479 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 DRD1P21728 446 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 TAGLNQ01995 201 aaKnown RBP4.49□□□□□ -1.69
CCDC39-204ENST00000476379 KIR2DS3Q14952 304 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 RBMS2Q15434 407 aaKnown RBP4.49□□□□□ -1.69
CCDC39-204ENST00000476379 TRILQ7L0X0 811 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 MAMDC2Q7Z304 686 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-204ENST00000476379 FJX1Q86VR8 437 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 C1orf210Q8IVY1 113 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 SLC35F3Q8IY50 421 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 OR5L1Q8NGL2 311 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 STOML3Q8TAV4 291 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 NPAS1Q99742 590 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 PRSS27Q9BQR3 290 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 NICN1Q9BSH3 213 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 JAM3Q9BX67 310 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 DEFB126Q9BYW3 111 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 FGF20Q9NP95 211 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-204ENST00000476379 UBQLN4Q9NRR5 601 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 SLC22A11Q9NSA0 550 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 FBXO7Q9Y3I1 522 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 IGHV1OR15-9A0A0B4J2B8 117 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 hCG_1807616A0A1W2PRN6 198 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 FAM74A7A6NL05 159 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 PIN1P1O15428 100 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF208O43345 1280 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 SPRY1O43609 319 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-204ENST00000476379 PPM1BO75688 479 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF43P17038 809 aa4.49□□□□□ -1.69
CCDC39-204ENST00000476379 HOXB9P17482 250 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms