RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 AQP6Q13520 282 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 KCNJ8Q15842 424 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 WDR25Q64LD2 544 aaPredicted RBP10.49□□□□□ -0.73
SKA3-206ENST00000475251 HIST2H2BDQ6DRA6 164 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 FBXW12Q6X9E4 464 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 GDPGP1Q6ZNW5 385 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 MOGAT3Q86VF5 341 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 OR5AS1Q8N127 324 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 DPP10Q8N608 796 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 CLDN22Q8N7P3 220 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 OR10AD1Q8NGE0 317 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 OR11L1Q8NGX0 322 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 LRTOMTQ8WZ04 291 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 ERGIC1Q969X5 290 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 C7orf26Q96N11 449 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 CGREF1Q99674 301 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 KAT8Q9H7Z6 458 aaKnown RBP10.49□□□□□ -0.73
SKA3-206ENST00000475251 ACOXLQ9NUZ1 547 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 ATPIF1Q9UII2 106 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 RIMS3Q9UJD0 308 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 NOTCH1P46531 2555 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 DOCK11Q5JSL3 2073 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 C5orf63A6NC05 138 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 ZNF879B4DU55 563 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 AHCYL1O43865 530 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 GPR137BO60478 399 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 IFNA14P01570 189 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 CFHR2P36980 270 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 IDH3AP50213 366 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 PROK1P58294 105 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 VMACQ2NL98 169 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 METTL11BQ5VVY1 283 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 RUSC1-AS1Q66K80 236 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 C1orf94Q6P1W5 598 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 CCDC80Q76M96 950 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 C1QL4Q86Z23 238 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 PNLDC1Q8NA58 520 aaKnown RBP10.48□□□□□ -0.73
SKA3-206ENST00000475251 C10orf82Q8WW14 230 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 BPIFA2Q96DR5 249 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 NDEL1Q9GZM8 345 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 DPAGT1Q9H3H5 408 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 EMC7Q9NPA0 242 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 ERVK-18Q9QC07 812 aa10.48□□□□□ -0.73
SKA3-206ENST00000475251 OR6C6A6NF89 314 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 XKRYO14609 159 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 TSPAN15O95858 294 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 IFI30P13284 250 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 GATA4P43694 442 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 ERFP50548 548 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 KRTAP10-3P60369 221 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 ST3GAL3Q11203 375 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 PIN1Q13526 163 aaPredicted RBP10.47□□□□□ -0.73
SKA3-206ENST00000475251 OR2T2Q6IF00 324 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 REC114Q7Z4M0 266 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 CELF2-AS1Q8N7Q2 184 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 OR10A6Q8NH74 314 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 FAM110DQ8TAY7 271 aaPredicted RBP10.47□□□□□ -0.73
SKA3-206ENST00000475251 LRRC8CQ8TDW0 803 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 APOBEC3DQ96AK3 386 aaPredicted RBP10.47□□□□□ -0.73
SKA3-206ENST00000475251 TECTBQ96PL2 329 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 EBF4Q9BQW3 602 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 CDADC1Q9BWV3 514 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 TRIM36Q9NQ86 728 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 TMEM100Q9NV29 134 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 GRHPRQ9UBQ7 328 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 WNK1Q9H4A3 2382 aa10.47□□□□□ -0.73
SKA3-206ENST00000475251 CENPVL3A0A0U1RRI6 287 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 BTBD17A6NE02 478 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 IQCF6A8MYZ5 107 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 C22orf46C9J442 243 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 F5H5P2 479 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 CSF1P09603 554 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 FPR3P25089 353 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 PSMB10P40306 273 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 SLC9A3P48764 834 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 MAGOHP61326 146 aaKnown RBP10.46□□□□□ -0.73
SKA3-206ENST00000475251 LSM6P62312 80 aaKnown RBP10.46□□□□□ -0.73
SKA3-206ENST00000475251 NFYCQ13952 458 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 SELPLGQ14242 412 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 C11orf91Q3C1V1 193 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 ZNF841Q6ZN19 808 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 LIAT1Q6ZQX7 453 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 OAFQ86UD1 273 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 IGFN1Q86VF2 1251 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 LDLRAD3Q86YD5 345 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 ZSCAN4Q8NAM6 433 aaPredicted RBP10.46□□□□□ -0.73
SKA3-206ENST00000475251 SCCPDHQ8NBX0 429 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 OR1F12Q8NHA8 337 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 Q8TCH9 128 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 TSPEARQ8WU66 669 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 WDFY2Q96P53 400 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 SH3GL1Q99961 368 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 HCAR1Q9BXC0 346 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 MMADHCQ9H3L0 296 aaPredicted RBP10.46□□□□□ -0.73
SKA3-206ENST00000475251 C16orf95Q9H693 158 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 PTTG3PQ9NZH4 202 aa10.46□□□□□ -0.73
SKA3-206ENST00000475251 CAB39Q9Y376 341 aaPredicted RBP10.46□□□□□ -0.73
SKA3-206ENST00000475251 NOP16Q9Y3C1 178 aaKnown RBP10.46□□□□□ -0.73
SKA3-206ENST00000475251 IGHV1-69DA0A0B4J2H0 117 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 TEX13CA0A0J9YWL9 993 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms