RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 CHRFAM7AQ494W8 412 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 ZNF362Q5T0B9 420 aaPredicted RBP16■□□□□ 0.15
CCDC171-206ENST00000474193 TMEM154Q6P9G4 183 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 UGT2A3Q6UWM9 527 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 ZBTB46Q86UZ6 589 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 OR9Q1Q8NGQ5 310 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 OR51B6Q9H340 312 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 TPK1Q9H3S4 243 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 FZR1Q9UM11 496 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 UGT2A1Q9Y4X1 527 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 GMPPBQ9Y5P6 360 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 A0A096LNT2 108 aa15.99■□□□□ 0.15
CCDC171-206ENST00000474193 VWC2LB2RUY7 222 aa15.99■□□□□ 0.15
CCDC171-206ENST00000474193 MMP7P09237 267 aaPredicted RBP15.99■□□□□ 0.15
CCDC171-206ENST00000474193 GCH1P30793 250 aa15.99■□□□□ 0.15
CCDC171-206ENST00000474193 KLHL12Q53G59 568 aa15.99■□□□□ 0.15
CCDC171-206ENST00000474193 C6orf52Q5T4I8 152 aa15.99■□□□□ 0.15
CCDC171-206ENST00000474193 C12orf73Q69YU5 71 aa15.99■□□□□ 0.15
CCDC171-206ENST00000474193 PLBD1Q6P4A8 553 aa15.99■□□□□ 0.15
CCDC171-206ENST00000474193 CXXC5Q7LFL8 322 aaKnown RBP15.99■□□□□ 0.15
CCDC171-206ENST00000474193 SYT9Q86SS6 491 aa15.99■□□□□ 0.15
CCDC171-206ENST00000474193 CPOQ8IVL8 374 aa15.99■□□□□ 0.15
CCDC171-206ENST00000474193 OR1J1Q8NGS3 322 aa15.99■□□□□ 0.15
CCDC171-206ENST00000474193 CDADC1Q9BWV3 514 aa15.99■□□□□ 0.15
CCDC171-206ENST00000474193 OR51V1Q9H2C8 321 aa15.99■□□□□ 0.15
CCDC171-206ENST00000474193 TAAR3PQ9P1P4 343 aa15.99■□□□□ 0.15
CCDC171-206ENST00000474193 POLR1DQ9Y2S0 133 aa15.99■□□□□ 0.15
CCDC171-206ENST00000474193 IGLV1-36A0A0B4J1U3 117 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 LOC100130705A0A1B0GUX0 176 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 C5orf49A4QMS7 147 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 FAM183AA6NL82 134 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 ZNF823P16415 610 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 SPI1P17947 270 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 GIFP27352 417 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 FMO3P31513 532 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 ALDH3B1P43353 468 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 CHN2P52757 468 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 RPS7P62081 194 aaKnown RBP15.98■□□□□ 0.15
CCDC171-206ENST00000474193 PSG4Q00888 419 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 ZNF718Q3SXZ3 478 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 LRP11Q86VZ4 500 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 TCEANCQ8N8B7 351 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 OR6K6Q8NGW6 343 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 FAM81AQ8TBF8 368 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 NABP1Q96AH0 204 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 HRASLS5Q96KN8 279 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 DDOQ99489 341 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 BPESC1Q9GZL8 116 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 MED20Q9H944 212 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 ELOVL3Q9HB03 270 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 POLE4Q9NR33 117 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 FAM118AQ9NWS6 357 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 LPAR3Q9UBY5 353 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 CDC42EP3Q9UKI2 254 aa15.98■□□□□ 0.15
CCDC171-206ENST00000474193 DCTN6O00399 190 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 GYPBP06028 91 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 ZNF250P15622 560 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 PYCR1P32322 319 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 GGT2P36268 569 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 PCGF3Q3KNV8 242 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 TTC23Q5W5X9 447 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 FAM166AQ6J272 317 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 FOXL2NBQ6ZUU3 175 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.97■□□□□ 0.15
CCDC171-206ENST00000474193 DHRSXQ8N5I4 330 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 CPEB3Q8NE35 698 aaKnown RBP15.97■□□□□ 0.15
CCDC171-206ENST00000474193 OR51L1Q8NGJ5 315 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 OR8J1Q8NGP2 316 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 AKR7LQ8NHP1 331 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 TMEM163Q8TC26 289 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 TRUB1Q8WWH5 349 aaKnown RBP15.97■□□□□ 0.15
CCDC171-206ENST00000474193 CYGBQ8WWM9 190 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 RDH5Q92781 318 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 IL4I1Q96RQ9 567 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 MBOAT4Q96T53 435 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 APOL4Q9BPW4 351 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 BEX2Q9BXY8 128 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 NMNAT2Q9BZQ4 307 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 OR2H1Q9GZK4 316 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 NDRG4Q9ULP0 352 aaKnown RBP15.97■□□□□ 0.15
CCDC171-206ENST00000474193 KCNS2Q9ULS6 477 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 ABCA2Q9BZC7 2435 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 CHD3Q12873 2000 aaKnown RBP15.97■□□□□ 0.15
CCDC171-206ENST00000474193 JMJD1CQ15652 2540 aa15.97■□□□□ 0.15
CCDC171-206ENST00000474193 LOC100289279A0A1B0GTE1 492 aa15.96■□□□□ 0.15
CCDC171-206ENST00000474193 PRODHO43272 600 aa15.96■□□□□ 0.15
CCDC171-206ENST00000474193 TPD52L2O43399 206 aaKnown RBP15.96■□□□□ 0.15
CCDC171-206ENST00000474193 PRKYO43930 277 aa15.96■□□□□ 0.15
CCDC171-206ENST00000474193 LMX1BO60663 402 aa15.96■□□□□ 0.15
CCDC171-206ENST00000474193 IGHV4-31P0DP07 118 aa15.96■□□□□ 0.15
CCDC171-206ENST00000474193 LSM6P62312 80 aaKnown RBP15.96■□□□□ 0.15
CCDC171-206ENST00000474193 TEKQ02763 1124 aa15.96■□□□□ 0.15
CCDC171-206ENST00000474193 SCRN3Q0VDG4 424 aa15.96■□□□□ 0.15
CCDC171-206ENST00000474193 MAD2L1BPQ15013 274 aaPredicted RBP15.96■□□□□ 0.15
CCDC171-206ENST00000474193 SLC35D3Q5M8T2 416 aa15.96■□□□□ 0.15
CCDC171-206ENST00000474193 LCN1P1Q5VSP4 162 aa15.96■□□□□ 0.15
CCDC171-206ENST00000474193 PAQR4Q8N4S7 273 aaPredicted RBP15.96■□□□□ 0.15
CCDC171-206ENST00000474193 PTP4A1Q93096 173 aa15.96■□□□□ 0.15
CCDC171-206ENST00000474193 SHARPINQ9H0F6 387 aa15.96■□□□□ 0.15
CCDC171-206ENST00000474193 CHODLQ9H9P2 273 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms