RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 RAB1CQ92928 201 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 DHRS1Q96LJ7 313 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 OR2V2Q96R30 315 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 DDOQ99489 341 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 PPP1R3EQ9H7J1 279 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 GCM1Q9NP62 436 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 TBCCD1Q9NVR7 557 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 MRPL22Q9NWU5 206 aaKnown RBP6.78□□□□□ -1.32
USP48-207ENST00000471752 PLEK2Q9NYT0 353 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 ADA2Q9NZK5 511 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 CD300AQ9UGN4 299 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 RPS6KA6Q9UK32 745 aa6.78□□□□□ -1.32
USP48-207ENST00000471752 DYSFO75923 2080 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 A0A0G2JMP0 313 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 A0A0X1KG70 313 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 MDFIC2A0A1B0GVS7 189 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 TMEM89A2RUT3 159 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 TVP23AA6NH52 213 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 F5H0A9 414 aaPredicted RBP6.77□□□□□ -1.33
USP48-207ENST00000471752 TMEM178BH3BS89 294 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 XKRYO14609 159 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 SLC22A2O15244 555 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 NDUFB2O95178 105 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 WNT2P09544 360 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 RHCEP18577 417 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 SDHAP31040 664 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 PYCR1P32322 319 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 GGT2P36268 569 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 MMP16P51512 607 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 POU4F2Q12837 409 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 MAB21L1Q13394 359 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 KCNMB1Q16558 191 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 MOGQ16653 247 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 RFX4Q33E94 735 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 KRTAP27-1Q3LI81 207 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 ZNF362Q5T0B9 420 aaPredicted RBP6.77□□□□□ -1.33
USP48-207ENST00000471752 LEG1Q6P5S2 330 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 SHQ1Q6PI26 577 aaKnown RBP6.77□□□□□ -1.33
USP48-207ENST00000471752 C12orf54Q6X4T0 127 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 HACD2Q6Y1H2 254 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 SYT9Q86SS6 491 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 MOGAT3Q86VF5 341 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 GLB1L2Q8IW92 636 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 FGFRL1Q8N441 504 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 ZNF283Q8N7M2 679 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 ATG16L2Q8NAA4 619 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 CYB561A3Q8NBI2 242 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 OR4M2Q8NGB6 313 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 OR51L1Q8NGJ5 315 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 OR8D4Q8NGM9 314 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 PTP4A1Q93096 173 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 MAP6Q96JE9 813 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 ERMAPQ96PL5 475 aaPredicted RBP6.77□□□□□ -1.33
USP48-207ENST00000471752 GPX7Q96SL4 187 aaPredicted RBP6.77□□□□□ -1.33
USP48-207ENST00000471752 CDRT15Q96T59 188 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 RASSF4Q9H2L5 321 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 EGLN3Q9H6Z9 239 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 ELOVL3Q9HB03 270 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 PATZ1Q9HBE1 687 aaKnown RBP6.77□□□□□ -1.33
USP48-207ENST00000471752 PNRC2Q9NPJ4 139 aaKnown RBP6.77□□□□□ -1.33
USP48-207ENST00000471752 VNN3Q9NY84 501 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 STX18Q9P2W9 335 aaKnown RBP6.77□□□□□ -1.33
USP48-207ENST00000471752 GPR160Q9UJ42 338 aa6.77□□□□□ -1.33
USP48-207ENST00000471752 CEACAM18A8MTB9 384 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 F5H5K5 113 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 WIPF1O43516 503 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 CCDC22O60826 627 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 ENTPD5O75356 428 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 MT-ND5P03915 603 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 COX5BP10606 129 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 ARHGDIAP52565 204 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 UBA52P62987 128 aaKnown RBP6.76□□□□□ -1.33
USP48-207ENST00000471752 TEKQ02763 1124 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 SRSF4Q08170 494 aaKnown RBP6.76□□□□□ -1.33
USP48-207ENST00000471752 ZNF154Q13106 437 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 GK2Q14410 553 aaPredicted RBP6.76□□□□□ -1.33
USP48-207ENST00000471752 MPPED2Q15777 294 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 CLEC12AQ5QGZ9 265 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 PRAMEF6Q5VXH4 476 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 FAM205BPQ63HN1 556 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 SLC18B1Q6NT16 456 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 SMARCD3Q6STE5 483 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 DPY19L2P2Q6ZN68 376 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 COLCA1Q6ZS62 124 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 RRM2BQ7LG56 351 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 NPEPL1Q8NDH3 523 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 SDR9C7Q8NEX9 313 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 SLC26A10Q8NG04 563 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 FAM216AQ8WUB2 273 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 GCDHQ92947 438 aaPredicted RBP6.76□□□□□ -1.33
USP48-207ENST00000471752 DACT3Q96B18 629 aaPredicted RBP6.76□□□□□ -1.33
USP48-207ENST00000471752 SLCO4A1Q96BD0 722 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 TIMD4Q96H15 378 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 PYURFQ96I23 114 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 MEGF10Q96KG7 1140 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 TMEM246Q9BRR3 403 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 CDADC1Q9BWV3 514 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 EGLN1Q9GZT9 426 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 OR52D1Q9H346 318 aa6.76□□□□□ -1.33
USP48-207ENST00000471752 RPRD1BQ9NQG5 326 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms