RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 BBS1Q8NFJ9 593 aa13.01□□□□□ -0.33
SNX13-205ENST00000471744 OR1J1Q8NGS3 322 aa13.01□□□□□ -0.33
SNX13-205ENST00000471744 SPTSSAQ969W0 71 aa13.01□□□□□ -0.33
SNX13-205ENST00000471744 IL4I1Q96RQ9 567 aa13.01□□□□□ -0.33
SNX13-205ENST00000471744 TEAD3Q99594 435 aa13.01□□□□□ -0.33
SNX13-205ENST00000471744 CACNG6Q9BXT2 260 aa13.01□□□□□ -0.33
SNX13-205ENST00000471744 TOR3AQ9H497 397 aa13.01□□□□□ -0.33
SNX13-205ENST00000471744 BARX1Q9HBU1 254 aaPredicted RBP13.01□□□□□ -0.33
SNX13-205ENST00000471744 PNRC2Q9NPJ4 139 aaKnown RBP13.01□□□□□ -0.33
SNX13-205ENST00000471744 DDX28Q9NUL7 540 aaKnown RBP13.01□□□□□ -0.33
SNX13-205ENST00000471744 SMPD3Q9NY59 655 aaPredicted RBP13.01□□□□□ -0.33
SNX13-205ENST00000471744 ITGB1BP2Q9UKP3 347 aa13.01□□□□□ -0.33
SNX13-205ENST00000471744 GRIP1Q9Y3R0 1128 aa13.01□□□□□ -0.33
SNX13-205ENST00000471744 CHD3Q12873 2000 aaKnown RBP13□□□□□ -0.33
SNX13-205ENST00000471744 ZNF878C9JN71 531 aa13□□□□□ -0.33
SNX13-205ENST00000471744 E9PQ18 207 aa13□□□□□ -0.33
SNX13-205ENST00000471744 H0YHG0 523 aa13□□□□□ -0.33
SNX13-205ENST00000471744 CASQ2O14958 399 aaPredicted RBP13□□□□□ -0.33
SNX13-205ENST00000471744 ZNF250P15622 560 aa13□□□□□ -0.33
SNX13-205ENST00000471744 GCH1P30793 250 aa13□□□□□ -0.33
SNX13-205ENST00000471744 PPOXP50336 477 aa13□□□□□ -0.33
SNX13-205ENST00000471744 ATP5J2P56134 94 aa13□□□□□ -0.33
SNX13-205ENST00000471744 TPTEP56180 551 aa13□□□□□ -0.33
SNX13-205ENST00000471744 KLF3P57682 345 aaPredicted RBP13□□□□□ -0.33
SNX13-205ENST00000471744 PPP1CBP62140 327 aa13□□□□□ -0.33
SNX13-205ENST00000471744 TMED1Q13445 227 aa13□□□□□ -0.33
SNX13-205ENST00000471744 EIF2B1Q14232 305 aaKnown RBP13□□□□□ -0.33
SNX13-205ENST00000471744 MST1LQ2TV78 715 aa13□□□□□ -0.33
SNX13-205ENST00000471744 KRTAP27-1Q3LI81 207 aa13□□□□□ -0.33
SNX13-205ENST00000471744 ZIK1Q3SY52 487 aaPredicted RBP13□□□□□ -0.33
SNX13-205ENST00000471744 AADACL4Q5VUY2 407 aa13□□□□□ -0.33
SNX13-205ENST00000471744 SHEQ5VZ18 495 aa13□□□□□ -0.33
SNX13-205ENST00000471744 TMEM154Q6P9G4 183 aa13□□□□□ -0.33
SNX13-205ENST00000471744 PRSS57Q6UWY2 283 aa13□□□□□ -0.33
SNX13-205ENST00000471744 MEPCEQ7L2J0 689 aaKnown RBP13□□□□□ -0.33
SNX13-205ENST00000471744 DPY19L4Q7Z388 723 aa13□□□□□ -0.33
SNX13-205ENST00000471744 ZNF101Q8IZC7 436 aa13□□□□□ -0.33
SNX13-205ENST00000471744 OR5L1Q8NGL2 311 aa13□□□□□ -0.33
SNX13-205ENST00000471744 ABHD4Q8TB40 342 aa13□□□□□ -0.33
SNX13-205ENST00000471744 FAM81AQ8TBF8 368 aa13□□□□□ -0.33
SNX13-205ENST00000471744 SYNPRQ8TBG9 265 aa13□□□□□ -0.33
SNX13-205ENST00000471744 RFKQ969G6 155 aa13□□□□□ -0.33
SNX13-205ENST00000471744 APOBEC3DQ96AK3 386 aaPredicted RBP13□□□□□ -0.33
SNX13-205ENST00000471744 MAP6Q96JE9 813 aa13□□□□□ -0.33
SNX13-205ENST00000471744 YIPF3Q9GZM5 350 aa13□□□□□ -0.33
SNX13-205ENST00000471744 VCXQ9H320 206 aa13□□□□□ -0.33
SNX13-205ENST00000471744 OR51B6Q9H340 312 aa13□□□□□ -0.33
SNX13-205ENST00000471744 SLCO1C1Q9NYB5 712 aa13□□□□□ -0.33
SNX13-205ENST00000471744 HAO2Q9NYQ3 351 aa13□□□□□ -0.33
SNX13-205ENST00000471744 GMPPBQ9Y5P6 360 aa13□□□□□ -0.33
SNX13-205ENST00000471744 TMEM14AQ9Y6G1 99 aa13□□□□□ -0.33
SNX13-205ENST00000471744 IGLV3-9A0A075B6K5 115 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 CCDC182A6NF36 153 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 MPZL2O60487 215 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 APOC1P02654 83 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 ERCC1P07992 297 aaPredicted RBP12.99□□□□□ -0.33
SNX13-205ENST00000471744 CDKN1AP38936 164 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 RPS27P42677 84 aaKnown RBP12.99□□□□□ -0.33
SNX13-205ENST00000471744 GRB2P62993 217 aaKnown RBP12.99□□□□□ -0.33
SNX13-205ENST00000471744 GGTLC2Q14390 218 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 TAF13Q15543 124 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 MBNL2Q5VZF2 373 aaKnown RBP12.99□□□□□ -0.33
SNX13-205ENST00000471744 RFPL4BQ6ZWI9 263 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 SLC16A9Q7RTY1 509 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 ZNF555Q8NEP9 628 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 OTOSQ8NHW6 89 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 ST7LQ8TDW4 575 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 SLAMF6Q96DU3 332 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 PERPQ96FX8 193 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 MBOAT4Q96T53 435 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 MNTQ99583 582 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 DOK1Q99704 481 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 COPS4Q9BT78 406 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 MRPL37Q9BZE1 423 aaKnown RBP12.99□□□□□ -0.33
SNX13-205ENST00000471744 DYNLRB1Q9NP97 96 aa12.99□□□□□ -0.33
SNX13-205ENST00000471744 WARS2Q9UGM6 360 aaKnown RBP12.99□□□□□ -0.33
SNX13-205ENST00000471744 TMEM129A0AVI4 362 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 SNTNA6NMZ2 147 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 F5H5K5 113 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 M0R129 80 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 M0R135 149 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 M0R233 179 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 SLC16A6O15403 523 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 SELENOFO60613 162 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 MT-ND5P03915 603 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 LYNP07948 512 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 DBHP09172 617 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 ACSM4P0C7M7 580 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 PEX2P28328 305 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 OTX1P32242 354 aaPredicted RBP12.98□□□□□ -0.33
SNX13-205ENST00000471744 SNRPGP62308 76 aaKnown RBP12.98□□□□□ -0.33
SNX13-205ENST00000471744 POU4F2Q12837 409 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 TESK1Q15569 626 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 LRRC36Q1X8D7 754 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 SLC25A30Q5SVS4 291 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 OGFRL1Q5TC84 451 aaPredicted RBP12.98□□□□□ -0.33
SNX13-205ENST00000471744 MEDAGQ5VYS4 303 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 DRAM2Q6UX65 266 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 GALNT4Q8N4A0 578 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 OR10S1Q8NGN2 331 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms