RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 C11orf40Q8WZ69 217 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 RDH5Q92781 318 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 ITPKCQ96DU7 683 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 WACQ9BTA9 647 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 NAA50Q9GZZ1 169 aaKnown RBP11.58□□□□□ -0.56
HMGN1-211ENST00000471260 TPK1Q9H3S4 243 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 CHODLQ9H9P2 273 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 PAK1IP1Q9NWT1 392 aaPredicted RBP11.58□□□□□ -0.56
HMGN1-211ENST00000471260 SLCO1C1Q9NYB5 712 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 DUSP13Q9UII6 198 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 ERGIC3Q9Y282 383 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 MALRD1Q5VYJ5 2156 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 SVEP1Q4LDE5 3571 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 CUBNO60494 3623 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.57□□□□□ -0.566e-11■■■■□ 23.7
HMGN1-211ENST00000471260 EFCAB9A8MZ26 197 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 J3KTA2 159 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 MPZL2O60487 215 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 LILRA1O75019 489 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 FAM20BO75063 409 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 SLC2A10O95528 541 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 TGFAP01135 160 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 ZNF182P17025 639 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-211ENST00000471260 MAKP20794 623 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 HNF1AP20823 631 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 ACHEP22303 614 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 GGT2P36268 569 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 ALDH3B1P43353 468 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 TMEM33P57088 247 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 KLF3P57682 345 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-211ENST00000471260 EMX1Q04741 257 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-211ENST00000471260 ELFN2Q5R3F8 820 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 SLC25A47Q6Q0C1 308 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 ZNF730Q6ZMV8 503 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 TMPRSS11FQ6ZWK6 438 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 MBOAT2Q6ZWT7 520 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 RRM2BQ7LG56 351 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 LRP11Q86VZ4 500 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 SYNPRQ8TBG9 265 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 GIPC3Q8TF64 312 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 MYDGFQ969H8 173 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 NABP1Q96AH0 204 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 FAM210AQ96ND0 272 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 NDEL1Q9GZM8 345 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 AKIP1Q9NQ31 210 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 NKIRAS2Q9NYR9 191 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 UGT2A1Q9Y4X1 527 aa11.57□□□□□ -0.56
HMGN1-211ENST00000471260 A0A087WUU8 490 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 PIP5K1CO60331 668 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 MT-ND5P03915 603 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 LCKP06239 509 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 FAM157BP0CG42 384 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 ZNF32P17041 273 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 STOMP27105 288 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 CDAP32320 146 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 BMXP51813 675 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 PCBD1P61457 104 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.56□□□□□ -0.56
HMGN1-211ENST00000471260 SGCAQ16586 387 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 NKPD1Q17RQ9 610 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 PCGF3Q3KNV8 242 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 PABPC1L2AQ5JQF8 200 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 DCDC5Q6ZRR9 648 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 FOXL2NBQ6ZUU3 175 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 SYT9Q86SS6 491 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 PAQR4Q8N4S7 273 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-211ENST00000471260 ARIH2OSQ8N7S6 290 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 OR51A7Q8NH64 312 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 CNIH3Q8TBE1 160 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 SNX33Q8WV41 574 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 TMEM158Q8WZ71 300 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 C1orf159Q96HA4 380 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 ZNF416Q9BWM5 594 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 DGCR6LQ9BY27 220 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 RACGAP1Q9H0H5 632 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 NMNAT1Q9HAN9 279 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-211ENST00000471260 ACOT13Q9NPJ3 140 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 FKBP14Q9NWM8 211 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 TAAR3PQ9P1P4 343 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 MYEF2Q9P2K5 600 aaKnown RBP11.56□□□□□ -0.56
HMGN1-211ENST00000471260 RHCGQ9UBD6 479 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 EIF3KQ9UBQ5 218 aaKnown RBP11.56□□□□□ -0.56
HMGN1-211ENST00000471260 TMEM5Q9Y2B1 443 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 LYVE1Q9Y5Y7 322 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 ENPP4Q9Y6X5 453 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 U3KQV3 271 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 ATRQ13535 2644 aa11.56□□□□□ -0.56
HMGN1-211ENST00000471260 TRAV27A0A087WT01 109 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 IGKV1D-43A0A0B4J1Z2 117 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 A0A1W2PRQ8 180 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 LRP5LA4QPB2 252 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 C17orf100A8MU93 164 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 ICMTO60725 284 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 SULT1C4O75897 302 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 HPXP02790 462 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 CST2P09228 141 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 OCM2P0CE71 109 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 OCMP0CE72 109 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-211ENST00000471260 CCL2P13500 99 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 SRD5A1P18405 259 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms