RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 RCN1Q15293 331 aa16.95■□□□□ 0.3
HDAC7-220ENST00000471235 ARL9Q6T311 187 aa16.95■□□□□ 0.3
HDAC7-220ENST00000471235 PRSS57Q6UWY2 283 aa16.95■□□□□ 0.3
HDAC7-220ENST00000471235 UNQ6126/PRO20091Q6UXV3 157 aa16.95■□□□□ 0.3
HDAC7-220ENST00000471235 DCXRQ7Z4W1 244 aa16.95■□□□□ 0.3
HDAC7-220ENST00000471235 SLC25A40Q8TBP6 338 aa16.95■□□□□ 0.3
HDAC7-220ENST00000471235 TMEM163Q8TC26 289 aa16.95■□□□□ 0.3
HDAC7-220ENST00000471235 ST7LQ8TDW4 575 aa16.95■□□□□ 0.3
HDAC7-220ENST00000471235 MARS2Q96GW9 593 aaKnown RBP16.95■□□□□ 0.3
HDAC7-220ENST00000471235 SORCS2Q96PQ0 1159 aa16.95■□□□□ 0.3
HDAC7-220ENST00000471235 DCLRE1CQ96SD1 692 aaKnown RBP16.95■□□□□ 0.3
HDAC7-220ENST00000471235 POFUT1Q9H488 388 aa16.95■□□□□ 0.3
HDAC7-220ENST00000471235 DYNLRB1Q9NP97 96 aa16.95■□□□□ 0.3
HDAC7-220ENST00000471235 GRIP1Q9Y3R0 1128 aa16.95■□□□□ 0.3
HDAC7-220ENST00000471235 IGLV3-9A0A075B6K5 115 aa16.94■□□□□ 0.3
HDAC7-220ENST00000471235 A0A1W2PPW3 197 aa16.94■□□□□ 0.3
HDAC7-220ENST00000471235 SELENOFO60613 162 aa16.94■□□□□ 0.3
HDAC7-220ENST00000471235 MPV17P39210 176 aa16.94■□□□□ 0.3
HDAC7-220ENST00000471235 RAD23AP54725 363 aa16.94■□□□□ 0.3
HDAC7-220ENST00000471235 KLF3P57682 345 aaPredicted RBP16.94■□□□□ 0.3
HDAC7-220ENST00000471235 RPS7P62081 194 aaKnown RBP16.94■□□□□ 0.3
HDAC7-220ENST00000471235 EFNB1P98172 346 aa16.94■□□□□ 0.3
HDAC7-220ENST00000471235 ECH1Q13011 328 aa16.94■□□□□ 0.3
HDAC7-220ENST00000471235 MAD2L1BPQ15013 274 aaPredicted RBP16.94■□□□□ 0.3
HDAC7-220ENST00000471235 RSPO1Q2MKA7 263 aaPredicted RBP16.94■□□□□ 0.3
HDAC7-220ENST00000471235 TMEM255AQ5JRV8 349 aa16.94■□□□□ 0.3
HDAC7-220ENST00000471235 BCDIN3DQ7Z5W3 292 aaKnown RBP16.94■□□□□ 0.3
HDAC7-220ENST00000471235 TGIF2LYQ8IUE0 185 aa16.94■□□□□ 0.3
HDAC7-220ENST00000471235 SYNPRQ8TBG9 265 aa16.94■□□□□ 0.3
HDAC7-220ENST00000471235 IPCEF1Q8WWN9 437 aaPredicted RBP16.94■□□□□ 0.3
HDAC7-220ENST00000471235 EME1Q96AY2 570 aa16.94■□□□□ 0.3
HDAC7-220ENST00000471235 MBOAT4Q96T53 435 aa16.94■□□□□ 0.3
HDAC7-220ENST00000471235 SLC29A1Q99808 456 aa16.94■□□□□ 0.3
HDAC7-220ENST00000471235 OR2J1Q9GZK6 312 aa16.94■□□□□ 0.3
HDAC7-220ENST00000471235 BARX1Q9HBU1 254 aaPredicted RBP16.94■□□□□ 0.3
HDAC7-220ENST00000471235 DDX28Q9NUL7 540 aaKnown RBP16.94■□□□□ 0.3
HDAC7-220ENST00000471235 TBCCD1Q9NVR7 557 aa16.94■□□□□ 0.3
HDAC7-220ENST00000471235 DUSP13Q9UII6 198 aa16.94■□□□□ 0.3
HDAC7-220ENST00000471235 E9PQ18 207 aa16.93■□□□□ 0.3
HDAC7-220ENST00000471235 H3BSA7 217 aa16.93■□□□□ 0.3
HDAC7-220ENST00000471235 M0R233 179 aa16.93■□□□□ 0.3
HDAC7-220ENST00000471235 TLX2O43763 284 aaPredicted RBP16.93■□□□□ 0.3
HDAC7-220ENST00000471235 ACSM4P0C7M7 580 aa16.93■□□□□ 0.3
HDAC7-220ENST00000471235 ANPEPP15144 967 aa16.93■□□□□ 0.3
HDAC7-220ENST00000471235 NAA10P41227 235 aaPredicted RBP16.93■□□□□ 0.3
HDAC7-220ENST00000471235 ALDH3B1P43353 468 aa16.93■□□□□ 0.3
HDAC7-220ENST00000471235 EIF2B1Q14232 305 aaKnown RBP16.93■□□□□ 0.3
HDAC7-220ENST00000471235 ZNF718Q3SXZ3 478 aa16.93■□□□□ 0.3
HDAC7-220ENST00000471235 ZIK1Q3SY52 487 aaPredicted RBP16.93■□□□□ 0.3
HDAC7-220ENST00000471235 LCN1P1Q5VSP4 162 aa16.93■□□□□ 0.3
HDAC7-220ENST00000471235 DPY19L4Q7Z388 723 aa16.93■□□□□ 0.3
HDAC7-220ENST00000471235 C1orf174Q8IYL3 243 aa16.93■□□□□ 0.3
HDAC7-220ENST00000471235 SLAMF6Q96DU3 332 aa16.93■□□□□ 0.3
HDAC7-220ENST00000471235 Q96MF0 132 aa16.93■□□□□ 0.3
HDAC7-220ENST00000471235 IL4I1Q96RQ9 567 aa16.93■□□□□ 0.3
HDAC7-220ENST00000471235 VRK1Q99986 396 aaPredicted RBP16.93■□□□□ 0.3
HDAC7-220ENST00000471235 FBXO9Q9UK97 447 aaPredicted RBP16.93■□□□□ 0.3
HDAC7-220ENST00000471235 F8P00451 2351 aa16.93■□□□□ 0.3
HDAC7-220ENST00000471235 ZNF878C9JN71 531 aa16.92■□□□□ 0.3
HDAC7-220ENST00000471235 ADRA2AP08913 450 aa16.92■□□□□ 0.3
HDAC7-220ENST00000471235 RGS6P49758 472 aa16.92■□□□□ 0.3
HDAC7-220ENST00000471235 AADACL4Q5VUY2 407 aa16.92■□□□□ 0.3
HDAC7-220ENST00000471235 NXNL2Q5VZ03 156 aa16.92■□□□□ 0.3
HDAC7-220ENST00000471235 MBNL2Q5VZF2 373 aaKnown RBP16.92■□□□□ 0.3
HDAC7-220ENST00000471235 ZBTB49Q6ZSB9 765 aa16.92■□□□□ 0.3
HDAC7-220ENST00000471235 ZCCHC24Q8N2G6 241 aaKnown RBP16.92■□□□□ 0.3
HDAC7-220ENST00000471235 KLF14Q8TD94 323 aaPredicted RBP16.92■□□□□ 0.3
HDAC7-220ENST00000471235 AMELYQ99218 206 aa16.92■□□□□ 0.3
HDAC7-220ENST00000471235 TOR3AQ9H497 397 aa16.92■□□□□ 0.3
HDAC7-220ENST00000471235 STARD10Q9Y365 291 aa16.92■□□□□ 0.3
HDAC7-220ENST00000471235 VPS13CQ709C8 3753 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 FLNAP21333 2647 aaKnown RBP16.91■□□□□ 0.3
HDAC7-220ENST00000471235 F5H5K5 113 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 J3QW42 95 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 SSX4O60224 188 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 LY6HO94772 140 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 IGHV3-13P01766 116 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 GCH1P30793 250 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 EFNA4P52798 201 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 NUDT6P53370 316 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 SELENOVP59797 346 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 ALKBH6Q3KRA9 238 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 SPATC1Q76KD6 591 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 SHFQ7M4L6 423 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 FAM81AQ8TBF8 368 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 HRASLS5Q96KN8 279 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 TEAD3Q99594 435 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 COPS4Q9BT78 406 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 ABHD6Q9BV23 337 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 TPK1Q9H3S4 243 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 TAAR3PQ9P1P4 343 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 KLHDC2Q9Y2U9 406 aa16.91■□□□□ 0.3
HDAC7-220ENST00000471235 MAP1AP78559 2803 aaPredicted RBP16.9■□□□□ 0.3
HDAC7-220ENST00000471235 YLPM1P49750 1951 aaKnown RBP16.9■□□□□ 0.3
HDAC7-220ENST00000471235 M0R135 149 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 MRPL3P09001 348 aaKnown RBP16.9■□□□□ 0.3
HDAC7-220ENST00000471235 OTX1P32242 354 aaPredicted RBP16.9■□□□□ 0.3
HDAC7-220ENST00000471235 ELF3P78545 371 aaPredicted RBP16.9■□□□□ 0.3
HDAC7-220ENST00000471235 GGTLC2Q14390 218 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 TRIP10Q15642 601 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms