RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 AIFM1O95831 613 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 ZNF250P15622 560 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 GALP22466 123 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 C21orf59P57076 290 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 RAB10P61026 200 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 SELENBP1Q13228 472 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 PON3Q15166 354 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 KCTD19Q17RG1 926 aaPredicted RBP3.27□□□□□ -1.89
LSM5-209ENST00000468872 TMEM179Q6ZVK1 233 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 H2AFVQ71UI9 128 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 SLC16A14Q7RTX9 510 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 MREGQ8N565 214 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 OR52K2Q8NGK3 314 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 OR4A4PQ8NGN8 299 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 FAM81AQ8TBF8 368 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 CD300LFQ8TDQ1 290 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 GIMAP1Q8WWP7 306 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 WFIKKN1Q96NZ8 548 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 TSSK3Q96PN8 268 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 ANP32EQ9BTT0 268 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 MRPL37Q9BZE1 423 aaKnown RBP3.27□□□□□ -1.89
LSM5-209ENST00000468872 GEMIN7Q9H840 131 aaKnown RBP3.27□□□□□ -1.89
LSM5-209ENST00000468872 ARFGEF1Q9Y6D6 1849 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 TROQ12816 1431 aaPredicted RBP3.27□□□□□ -1.89
LSM5-209ENST00000468872 CASKIN1Q8WXD9 1431 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 BRCA1P38398 1863 aaKnown RBP3.26□□□□□ -1.89
LSM5-209ENST00000468872 TRPM1Q7Z4N2 1603 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 UBR5O95071 2799 aaPredicted RBP3.26□□□□□ -1.89
LSM5-209ENST00000468872 CENPJQ9HC77 1338 aaPredicted RBP3.26□□□□□ -1.89
LSM5-209ENST00000468872 SLIT3O75094 1523 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 FBN2P35556 2912 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 GLYATL1P3A0A0U1RQE8 302 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 SERTM2A0A1B0GWG4 89 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 KMOO15229 486 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 DPM1O60762 260 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 SLC25A27O95847 323 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 SERPINA5P05154 406 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 ZDHHC11BP0C7U3 371 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 GZMAP12544 262 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 RRM2P31350 389 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 FOXN2P32314 431 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 ZNF136P52737 540 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 RGS8P57771 180 aaPredicted RBP3.26□□□□□ -1.89
LSM5-209ENST00000468872 SLC7A9P82251 487 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 HMGCS1Q01581 520 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 SLC25A11Q02978 314 aaKnown RBP3.26□□□□□ -1.89
LSM5-209ENST00000468872 CLINT1Q14677 625 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 C22orf42Q6IC83 251 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 REEP3Q6NUK4 255 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 TMEM220Q6QAJ8 160 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 Q6ZVH6 145 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 BZW1Q7L1Q6 419 aaKnown RBP3.26□□□□□ -1.89
LSM5-209ENST00000468872 CENPQQ7L2Z9 268 aaPredicted RBP3.26□□□□□ -1.89
LSM5-209ENST00000468872 SCD5Q86SK9 330 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 IQCKQ8N0W5 287 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 SRSF12Q8WXF0 261 aaKnown RBP3.26□□□□□ -1.89
LSM5-209ENST00000468872 NRGNQ92686 78 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 TAAR1Q96RJ0 339 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 SLC25A39Q9BZJ4 359 aaPredicted RBP3.26□□□□□ -1.89
LSM5-209ENST00000468872 GPATCH2LQ9NWQ4 482 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 RBAKQ9NYW8 714 aaPredicted RBP3.26□□□□□ -1.89
LSM5-209ENST00000468872 PTTG3PQ9NZH4 202 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 GCNT4Q9P109 453 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 GOLT1BQ9Y3E0 138 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 MRPS18BQ9Y676 258 aaKnown RBP3.26□□□□□ -1.89
LSM5-209ENST00000468872 NHSQ6T4R5 1651 aa3.26□□□□□ -1.89
LSM5-209ENST00000468872 RIF1Q5UIP0 2472 aaKnown RBP3.26□□□□□ -1.89
LSM5-209ENST00000468872 SBNO1A3KN83 1393 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 CEP152O94986 1710 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 DMDP11532 3685 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 COL4A6Q14031 1691 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 BOLA2-SMG1P6H3BVE0 249 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 SIRPB1O00241 398 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 CALM1P0DP23 149 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 CALM2P0DP24 149 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 CALM3P0DP25 149 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 DCKP27707 260 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 HOXA9P31269 272 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 SLC1A1P43005 524 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 ATP5OP48047 213 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 ADARB1P78563 741 aaKnown RBP3.25□□□□□ -1.89
LSM5-209ENST00000468872 MECOMQ03112 1051 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 LIPEQ05469 1076 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 ZNF493Q6ZR52 646 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 STRADAQ7RTN6 431 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 OFCC1Q8IZS5 231 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 PRELID2Q8N945 189 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 DUSP18Q8NEJ0 188 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 LINC00167Q96N53 147 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 SERPINB12Q96P63 405 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 EXO5Q9H790 373 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 UXTQ9UBK9 157 aaPredicted RBP3.25□□□□□ -1.89
LSM5-209ENST00000468872 TMED5Q9Y3A6 229 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 SPTBN2O15020 2390 aa3.25□□□□□ -1.89
LSM5-209ENST00000468872 GVINP1Q7Z2Y8 2422 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 CEP250Q9BV73 2442 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 PIEZO2Q9H5I5 2752 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 KIF13BQ9NQT8 1826 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 MBD5Q9P267 1494 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 DMXL1Q9Y485 3027 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms