RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 Q9H521 79 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 PLCXD1Q9NUJ7 323 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 COPS3Q9UNS2 423 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 KLHDC2Q9Y2U9 406 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 HRNRQ86YZ3 2850 aaPredicted RBP13.82□□□□□ -0.2
GPC1-207ENST00000466624 A0A1W2PPR1 153 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 FADS2O95864 444 aaKnown RBP13.82□□□□□ -0.2
GPC1-207ENST00000466624 PLAUP00749 431 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 CCL2P13500 99 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 OPRL1P41146 370 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 RAD52P43351 418 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 TPTEP56180 551 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 CSNK2BP67870 215 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 HGFACQ04756 655 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 SMN1Q16637 294 aaKnown RBP13.82□□□□□ -0.2
GPC1-207ENST00000466624 RSPO1Q2MKA7 263 aaPredicted RBP13.82□□□□□ -0.2
GPC1-207ENST00000466624 LAIR2Q6ISS4 152 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 TMEM200AQ86VY9 491 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 PAQR4Q8N4S7 273 aaPredicted RBP13.82□□□□□ -0.2
GPC1-207ENST00000466624 LILRB1Q8NHL6 650 aaPredicted RBP13.82□□□□□ -0.2
GPC1-207ENST00000466624 SPTSSAQ969W0 71 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 AMELYQ99218 206 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 KCNJ15Q99712 375 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 COPS4Q9BT78 406 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 BCL2L14Q9BZR8 327 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 ZNF442Q9H7R0 627 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 NIPAL2Q9H841 368 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 ELOVL3Q9HB03 270 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 TBCCD1Q9NVR7 557 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 EIF3KQ9UBQ5 218 aaKnown RBP13.82□□□□□ -0.2
GPC1-207ENST00000466624 POU2F3Q9UKI9 436 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 CRYBG3Q68DQ2 2970 aa13.82□□□□□ -0.2
GPC1-207ENST00000466624 HS3ST1O14792 307 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 DENRO43583 198 aaKnown RBP13.81□□□□□ -0.2
GPC1-207ENST00000466624 ZNF254O75437 659 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 IGHA1P01876 353 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 APOC1P02654 83 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 ACSM4P0C7M7 580 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 PIPP12273 146 aaPredicted RBP13.81□□□□□ -0.2
GPC1-207ENST00000466624 CCNOP22674 350 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 TUBG1P23258 451 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 DCTDP32321 178 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 GLRXP35754 106 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 WNT5AP41221 380 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 HCCSP53701 268 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 UCP2P55851 309 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 RPS23P62266 143 aaKnown RBP13.81□□□□□ -0.2
GPC1-207ENST00000466624 EGR3Q06889 387 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 TAF13Q15543 124 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 ZNF544Q6NX49 715 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 ZNF322Q6U7Q0 402 aaPredicted RBP13.81□□□□□ -0.2
GPC1-207ENST00000466624 DRAM2Q6UX65 266 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 EGFL6Q8IUX8 553 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 ZNF679Q8IYX0 411 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 SMAP2Q8WU79 429 aaPredicted RBP13.81□□□□□ -0.2
GPC1-207ENST00000466624 SLC7A6Q92536 515 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 AKAP1Q92667 903 aaKnown RBP eCLIP13.81□□□□□ -0.23e-8■■■■■ 29.5
GPC1-207ENST00000466624 FBXW5Q969U6 566 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 C4orf45Q96LM5 186 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 COG8Q96MW5 612 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 OR8B4Q96RC9 309 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 MYCBPQ99417 103 aaPredicted RBP13.81□□□□□ -0.2
GPC1-207ENST00000466624 JAM3Q9BX67 310 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 MROQ9BYG7 248 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 PLEKHF2Q9H8W4 249 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 AMBNQ9NP70 447 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 FGF20Q9NP95 211 aaPredicted RBP13.81□□□□□ -0.2
GPC1-207ENST00000466624 TUBG2Q9NRH3 451 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 INPP5EQ9NRR6 644 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 CENPMQ9NSP4 180 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 CNOT2Q9NZN8 540 aaKnown RBP13.81□□□□□ -0.2
GPC1-207ENST00000466624 ATP23Q9Y6H3 246 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 DCHS2Q6V1P9 2916 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 ROS1P08922 2347 aa13.81□□□□□ -0.2
GPC1-207ENST00000466624 NBPF19A0A087WUL8 3843 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 A0A1W2PQL4 384 aaPredicted RBP13.8□□□□□ -0.2
GPC1-207ENST00000466624 E7EQL1 145 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 M0R135 149 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 SMPD2O60906 423 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 APOL3O95236 402 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 ABHD16AO95870 558 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 DBHP09172 617 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 H2BFMP0C1H6 154 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 HSD11B1P28845 292 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 SNTB2Q13425 540 aaKnown RBP13.8□□□□□ -0.2
GPC1-207ENST00000466624 C6orf141Q5SZD1 244 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 KRT80Q6KB66 452 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 COLCA1Q6ZS62 124 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 KRT77Q7Z794 578 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 ACBD7Q8N6N7 88 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 ZNF611Q8N823 705 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 OR10H4Q8NGA5 316 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 ZNF799Q96GE5 643 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 DHRS9Q9BPW9 319 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 C1QTNF5Q9BXJ0 243 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 CA10Q9NS85 328 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 CISD1Q9NZ45 108 aaKnown RBP13.8□□□□□ -0.2
GPC1-207ENST00000466624 GRIP1Q9Y3R0 1128 aa13.8□□□□□ -0.2
GPC1-207ENST00000466624 UNC79Q9P2D8 2635 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 EFCAB10A6NFE3 127 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms